New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1473410 =168 (0.850)6 (0.030) 5/166 31.6 0.03 intergenic (+117/+102) nadE/RCAP_rcc01367 NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
?NC_014034 3382066 = 167 (0.700)intergenic (+100/+129) ispB/RCAP_rcc03185 octaprenyl‑diphosphate synthase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 207 total aligned reads displayed.

AAGGCACCCGGTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCAGT  >  NC_014034/3381966‑3382166
                                                                                                     |                                                                                                    
aaGGCACCCGGTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCa                                                                                                      >  2:81527/1‑101 (MQ=255)
  ggCACCCGGTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATg                                                                                                    <  1:275819/101‑1 (MQ=255)
       ccGGTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.CGTGCCCAAAGCACTCGAGCAGCGCCCGCCCCGCCCATggcggg                                                                                               >  1:570591/1‑101 (MQ=255)
         ggTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATggcgggcg                                                                                             <  1:1452807/101‑1 (MQ=255)
          gTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGgcgc                                                                                            >  2:1187018/1‑101 (MQ=255)
          gTCTGGCCAAGGCCATCGCCTTGGCCCTGCCCTCCATCCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGgcgc                                                                                            <  1:1831381/101‑1 (MQ=255)
            cTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATCCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCtt                                                                                          <  1:3835918/101‑1 (MQ=255)
             tGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtc                                                                                         <  1:971215/101‑1 (MQ=255)
              ggCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtct                                                                                        <  2:1017983/101‑1 (MQ=255)
              ggCCAAGGCCATCGCCTTGGCCCTGCGCTCCATCCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtct                                                                                        <  1:4458606/101‑1 (MQ=255)
              gcccAAGGCCATCCCCTGGGCCCTGCGCCCCATTCCCCCCAGGCCCCCCG.GGCGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtct                                                                                        <  1:81533/99‑1 (MQ=18)
               gCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtctc                                                                                       >  2:2578780/1‑101 (MQ=255)
                ccAAGTCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCCCTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcg                                                                                      <  2:2993526/101‑1 (MQ=255)
                 cAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTtctccc                                                                                     >  2:1486559/1‑99 (MQ=255)
                  aaGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGGGCCTCTcgcc                                                                                    >  1:370013/1‑101 (MQ=255)
                   aGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTccccc                                                                                   >  1:4096392/1‑101 (MQ=255)
                   aGGCCATCGCCTTGGCCCTGCGCTCCATCCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgccc                                                                                   <  2:3434444/101‑1 (MQ=255)
                    ggCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccg                                                                                  <  2:1563217/101‑1 (MQ=255)
                    ggCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccc                                                                                  >  2:3561544/1‑100 (MQ=255)
                    gcccATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccg                                                                                  <  2:4273925/99‑1 (MQ=255)
                       actagCCTTGGGCCTGCCCTCATTTCCCCCTATGACCGGGGCAGT.CTCAAGACACTCGGCCACCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCccgccg                                                                               <  2:1086927/97‑1 (MQ=0)
                        aTCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTcgcccgcccg                                                                              >  2:2639180/1‑99 (MQ=255)
                        aTCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCgg                                                                              >  2:3303315/1‑101 (MQ=255)
                        aTCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCgg                                                                              >  1:3328075/1‑101 (MQ=255)
                          cGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCgggg                                                                            >  2:3100609/1‑100 (MQ=255)
                           gCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCCGGag                                                                           >  2:3019938/1‑100 (MQ=255)
                            ccTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCCGGCCg                                                                          >  2:2196538/1‑101 (MQ=255)
                            ccTTGGCCCTGCGCTCCATCCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACg                                                                          <  1:306814/101‑1 (MQ=255)
                            ccTTGGCCCTGCCCTCCATCCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACg                                                                          <  1:342824/101‑1 (MQ=255)
                             cTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGGGCTTTTCGCCCCCCGGGGCgg                                                                         >  1:3967124/1‑101 (MQ=18)
                             cTTGGCCCTGCGCTCCATCCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACgg                                                                         <  2:967664/101‑1 (MQ=255)
                               tGGCCCTGCCCTCCATCCCCCCCAAGCCCCCCG.AGTGCCCAAAGCACCCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGgc                                                                       <  2:2644132/101‑1 (MQ=17)
                                 gCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCCGGGCGGgcgc                                                                     >  1:3015057/1‑101 (MQ=255)
                                    cTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGggccgc                                                                  >  2:4023019/1‑101 (MQ=255)
                                     tGCCCTCCTTCCCCCCCATGCCCCCCG.AGTCCCCAAAGCACTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCgccgcc                                                                 <  2:1806598/101‑1 (MQ=14)
                                       cgcTCCATTCCCCCCATGACCCCCG.AGTGCCCCAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCGGGACGGGCGCCGcccc                                                               >  1:1468577/1‑100 (MQ=255)
                                       cgcTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGGGCTTTTCGCCCGCCGGGACGGGGGCCGcccc                                                               >  2:1075773/1‑100 (MQ=255)
                                         cgccATCCCCCCCATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCctct                                                             <  2:2869184/99‑1 (MQ=255)
                                          tCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGCGGCTTCTCCCCCGCCGGGGCGGGGGGCCCCCCCTg                                                            >  1:1173253/1‑101 (MQ=14)
                                            cctcacccccAGGCCCCCTG.AGTGCCCAAAGCACTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTc                                                          <  1:1762882/96‑1 (MQ=14)
                                            cATCCCCCCCATGCCCCCCG.AGTGCCAAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTc                                                          <  2:2342742/101‑1 (MQ=255)
                                              ttCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGCCCTCTGTcgc                                                        >  2:3500937/1‑101 (MQ=255)
                                              ttCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGGGCCCCCCCCTGTcgc                                                        >  1:4233811/1‑101 (MQ=255)
                                              tcccccccATGCCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTcgc                                                        <  1:640469/99‑1 (MQ=255)
                                               cccccccATGCCCCCCG.AGGCCCCAAAGCCCGCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTcgcg                                                       <  1:3329961/100‑1 (MQ=14)
                                                 cccccATGCCCCCCG.AGTGCCAAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCt                                                     <  2:941419/101‑1 (MQ=255)
                                                 cccccATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCt                                                     >  2:1516254/1‑101 (MQ=255)
                                                  ccccATGCCCCCCG.AGTCCCAAAAGCACCCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCtt                                                    <  2:2731132/101‑1 (MQ=17)
                                                   cccATGCCCCCCG.AGTGCCCAAAGCCCTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTg                                                   <  1:247320/101‑1 (MQ=255)
                                                     caggccccccG.AGTCCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTggg                                                 <  2:315330/96‑1 (MQ=255)
                                                      ctgccccccG.AGGGCCCAACGCCCTGGGGCGCCCCCCGCCCCGCCCAGGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGa                                                <  1:3246589/97‑1 (MQ=14)
                                                      aTGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCCTGGGa                                                >  2:4502939/1‑101 (MQ=38)
                                                      aTGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCCCTGTCGCGCTTGGGa                                                >  2:634788/1‑101 (MQ=255)
                                                       tgccccccG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGaa                                               <  2:2653595/98‑1 (MQ=255)
                                                       ggccccccG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGaa                                               <  1:2590106/98‑1 (MQ=255)
                                                        gccccccG.AGTGCCCAAAGCCCTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGaaa                                              <  2:2918396/99‑1 (MQ=255)
                                                        gACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGGGCCGCCCTCTGTCGCGCTTGGGaaa                                              >  1:2069531/1‑101 (MQ=255)
                                                         ccccccG.AGTGCCCAAAGCCCTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGaaaa                                             <  2:4053913/100‑1 (MQ=255)
                                                         aCCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCCGTCGCGCTTGGGaaaa                                             >  2:1670779/1‑101 (MQ=255)
                                                            cccG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACgg                                          <  1:1502818/101‑1 (MQ=255)
                                                               g.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCGGGGCCGGGGCCGCCCCCCGTCGCGCCTGGGCAAACGGTCt                                       >  1:4405266/1‑101 (MQ=11)
                                                                  gTGCCCAAGGCCCGCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTg                                     <  1:1321452/101‑1 (MQ=255)
                                                                  gTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTg                                     >  1:2223332/1‑101 (MQ=255)
                                                                   tGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCttat                                    >  2:2904318/1‑99 (MQ=255)
                                                                   tGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGCCCTCTGTCGCGCTTGGGGAAACGGTCTTGt                                    >  2:4293817/1‑101 (MQ=255)
                                                                        aaaGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCCTCTCGCCCGCCCGGACGGGGGCCGCCCCCCGGCGCGCCTGGGGAAACGGGCTTGTGGCac                               >  2:4493682/1‑100 (MQ=14)
                                                                         aggcccccGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAAc                              <  1:3172451/94‑1 (MQ=255)
                                                                          aGCACTGGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAAcc                             <  2:3652914/101‑1 (MQ=255)
                                                                           gcccTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCg                            <  1:403283/98‑1 (MQ=255)
                                                                            cccTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCgg                           <  1:2132012/99‑1 (MQ=255)
                                                                            cACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCgg                           >  2:4612822/1‑101 (MQ=255)
                                                                            cACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCCCTGTCGCGCTTGGGAAAACGGGCTTGTCGCAACCgg                           >  1:2161510/1‑101 (MQ=255)
                                                                              ctggggCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCt                         <  2:3246388/98‑1 (MQ=255)
                                                                              cccggccggcgcCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCt                         <  2:3218685/93‑1 (MQ=255)
                                                                              cTCGGGCGGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCt                         <  1:3103260/101‑1 (MQ=255)
                                                                              cTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCCCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGGAAACGGTCTTGTCGCAACCGGCt                         >  1:76791/1‑101 (MQ=255)
                                                                               ccggccggcgcCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTc                        <  1:270996/94‑1 (MQ=255)
                                                                               ccGGGCGGCCCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTc                        <  2:4159776/100‑1 (MQ=255)
                                                                                 gggCGGCGCCCGCCCCGGCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGa                      <  2:3994065/101‑1 (MQ=255)
                                                                                    cAGCGCCCGCCCCGCCCATGGCGGGCGGTTTTCGCCCCCCGGGACGGGCGCCGCCCCCCGTCCGGCTTGGGCAAACGGACTTGTTGCAACCGGGGCGAAAc                   >  1:3625284/1‑101 (MQ=17)
                                                                                    cAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAAc                   <  2:458627/101‑1 (MQ=255)
                                                                                     aGCGCCCGCCCCGCCCATGGCGGGGGCTTCTCGCCCCCCGGGACGGGCGCCGCCCCCTGTCGCGCTTGGGAAAACGGGCTTGTCGCAACCGGCCCCaaaag                  >  1:3552631/1‑99 (MQ=18)
                                                                                     aGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGGCTTGTCGCAACCGGCTCCAAAcg                  >  1:3053561/1‑101 (MQ=255)
                                                                                      gcgcCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGGCTTGTCGCAACCGGCTCGAAAcgg                 >  2:3229347/1‑101 (MQ=255)
                                                                                       cgcccgccCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCAGGCGCCGCCCTCTGCTGCGGCTGGGGATGCCGTCATGGCGCAACGGGCAAGaaaaagg                >  2:12998/1‑97 (MQ=17)
                                                                                        gcccgcccCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAAcgggc               <  1:4570786/101‑1 (MQ=255)
                                                                                        ccccgccccgcCCATGGCGGGCGCTCCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAAcgggc               <  1:1285722/100‑1 (MQ=255)
                                                                                         cccgccccgcCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAAcgggcg              >  2:2218515/1‑101 (MQ=255)
                                                                                           cgccccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAAcgggcggg            <  1:1218456/101‑1 (MQ=255)
                                                                                            gccccgcccATGGGGGTCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCgggg           <  2:4415945/101‑1 (MQ=255)
                                                                                             ccccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGa          <  2:3697878/101‑1 (MQ=255)
                                                                                              cccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGGAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCggggga         >  1:2320419/1‑99 (MQ=255)
                                                                                              cccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGaa         <  1:88888/101‑1 (MQ=255)
                                                                                              cccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGaa         <  2:558548/101‑1 (MQ=255)
                                                                                               ccgcccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGaaa        <  2:649955/101‑1 (MQ=255)
                                                                                               ccgcccATGGCGGGCCCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGaaa        <  2:2095378/101‑1 (MQ=255)
                                                                                               ccgcccAGGGCGGGCGCTGCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGaaa        <  1:1558006/101‑1 (MQ=255)
                                                                                                   ccATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCa    <  2:523014/101‑1 (MQ=255)
                                                                                                    cATGGCGGCCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCAg   <  1:3100853/101‑1 (MQ=255)
                                                                                                     aTGGCGGGCGCTTCTCGCCGGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCCAAACGGGCGGGGAAAGGCAGt  <  1:2639365/101‑1 (MQ=255)
                                                                                                     |                                                                                                    
AAGGCACCCGGTCTGGCCAAGGCCATCGCCTTGGCCCTGCGCTCCATTCCCCCCATGACCCCCG.AGTGCCCAAAGCACTCGGGCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGCCCTCTGTCGCGCTTGGGAAAACGGTCTTGTCGCAACCGGCTCGAAACGGGCGGGGAAAGGCAGT  >  NC_014034/3381966‑3382166

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 20 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG