BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473412 =	158 (0.820)	7 (0.040)	2/158	34.2	0.05	intergenic (+119/+100)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
*	?	NC_014034	2945121 =	127 (0.530)	7 (0.040)	2/158	34.2	0.05	intergenic (+98/+346)	RCAP_rcc02755/RCAP_rcc02756	metallo‑beta‑lactamase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 164 total aligned reads displayed.


TGAGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCGGGGAAAAG  >  NC_014034/2945021‑2945221


tgAGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.Cccgccccgcc                                                                                                      <  1:25736/101‑1 (MQ=255)


 gAGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCcgccccgccc                                                                                                     <  2:2642942/101‑1 (MQ=255)


  aGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCgccccgcccc                                                                                                    >  2:2165186/1‑101 (MQ=255)


  aGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCgccccgcccc                                                                                                    <  1:2207527/101‑1 (MQ=255)


   gCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCt                                                                                                   <  2:4486612/101‑1 (MQ=255)


   gCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCt                                                                                                   <  2:4376824/101‑1 (MQ=255)


   gCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCt                                                                                                   >  2:2970653/1‑101 (MQ=255)


   gCGGGAAGATTTGACCGAGGCCACCGCCGAGCTCAGGTGACACAGCCTTCCCGGGACCGCGGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCt                                                                                                   <  2:1933190/101‑1 (MQ=18)


    cGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTg                                                                                                  <  2:551635/101‑1 (MQ=255)


    cGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGACGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTg                                                                                                  >  2:824841/1‑101 (MQ=255)


     gggAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAACCGTCCCGGCCAGCG.CCCGCCCCGCCCCTgg                                                                                                 <  1:4149200/101‑1 (MQ=255)


      ggAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTggc                                                                                                >  2:27508/1‑101 (MQ=255)


       gAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTggcg                                                                                               >  1:4608178/1‑101 (MQ=255)


        aaGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTggcgg                                                                                              >  1:3381866/1‑101 (MQ=255)


         aGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCCAAGCGTCCCGGCCAACG.CCCGCCCCCCCCCCggcggg                                                                                             >  1:1725682/1‑101 (MQ=18)


           aTTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTggcgggcg                                                                                           >  1:78155/1‑101 (MQ=255)


            tttGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGgcgc                                                                                          >  1:607183/1‑101 (MQ=255)


            tttGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGCCGGgcgc                                                                                          >  1:1839624/1‑101 (MQ=255)


              tGACCGAGGCCATCGCCGAGGTCATGTGCCACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCtt                                                                                        <  1:4409191/101‑1 (MQ=255)


              tGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCtt                                                                                        >  2:4597620/1‑101 (MQ=255)


              tGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCtt                                                                                        >  2:323092/1‑101 (MQ=255)


                 ccGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTtctc                                                                                     >  1:2159748/1‑101 (MQ=255)


                 ccGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTtctc                                                                                     >  1:4272902/1‑101 (MQ=255)


                  cggggCCATCGCCGAGGTCATGTGACACCGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcg                                                                                    <  1:2970882/98‑1 (MQ=255)


                  cGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcg                                                                                    >  2:1467433/1‑101 (MQ=255)


                   gAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCCGGCGGGGGCTtccccc                                                                                   >  1:394740/1‑97 (MQ=255)


                    aGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgcc                                                                                  >  2:3458667/1‑101 (MQ=255)


                     ggCCATCGCGGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgccc                                                                                 <  2:1699939/101‑1 (MQ=255)


                     ggCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgccc                                                                                 <  2:2338623/101‑1 (MQ=255)


                      gCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgcccg                                                                                >  1:415841/1‑101 (MQ=255)


                      gCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgcccg                                                                                >  2:884471/1‑101 (MQ=255)


                        cATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTcgcccgcc                                                                              >  2:441974/1‑101 (MQ=255)


                         ctggCCGAGGACATGTGACACAGCCTTCCGGGGACCGCGGGGGCGCCAATGCGCCCCGGCAAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCccgccg                                                                             <  2:3694102/98‑1 (MQ=17)


                         aTCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCccgccg                                                                             >  2:1396515/1‑101 (MQ=255)


                            gCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgcccggc                                                                          >  2:3313461/1‑101 (MQ=255)


                             ccGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggcc                                                                         >  1:1862029/1‑101 (MQ=255)


                             ccGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggcc                                                                         <  1:55822/101‑1 (MQ=255)


                              cGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGGGCCTCTCGCCCgccgggccg                                                                        >  1:1578496/1‑101 (MQ=255)


                              cGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggccg                                                                        >  2:4367388/1‑101 (MQ=255)


                               gAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggccgg                                                                       >  2:669311/1‑101 (MQ=255)


                               gAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggccgg                                                                       >  2:370051/1‑101 (MQ=255)


                               gAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCgccgggccgg                                                                       >  1:1037756/1‑101 (MQ=255)


                                 ggTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCcgggccgggc                                                                     <  2:1775870/101‑1 (MQ=255)


                                  gTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGgcg                                                                    >  1:2105937/1‑101 (MQ=255)


                                    cATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGcc                                                                  >  2:2388036/1‑101 (MQ=255)


                                     aTGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCg                                                                 >  1:1283606/1‑101 (MQ=255)


                                     aTGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCg                                                                 <  2:1815935/101‑1 (MQ=255)


                                      tgtgACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCgg                                                                >  2:879405/1‑101 (MQ=255)


                                      tgtgACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCCCCCGCCGGGCCGGGCGcccg                                                                >  1:1646711/1‑99 (MQ=255)


                                      tgtgACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGGCCCGGCCAGCG.CCCGCCCCGCGCCTGGCCGGTGCTTCTCTCCCGCCCCGCCGGGTGcccg                                                                >  2:1311849/1‑99 (MQ=14)


                                         gACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCct                                                             >  2:672479/1‑101 (MQ=40)


                                            ccaGCCGCCCCGGGCCCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCtg                                                          <  1:2772868/100‑1 (MQ=9)


                                            acaGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGGctccg                                                          >  1:4405334/1‑99 (MQ=255)


                                             caGCCGCCCCGGGCCCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCtgt                                                         <  1:3486134/101‑1 (MQ=9)


                                              aGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCtgtt                                                        >  1:1797464/1‑101 (MQ=35)


                                               gCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCtgttg                                                       >  2:3989727/1‑101 (MQ=34)


                                                 cGTCCGGGGCCCGCCGGGCCCCAAAAGCGCCCGGTCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTtgtg                                                     <  2:607122/101‑1 (MQ=11)


                                                  gTCGCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGAGCCGGGCGCCGGCATCTGGTGTGc                                                    >  2:3050796/1‑101 (MQ=11)


                                                                   gcgcCAACGCGCCCCGCCCAGCC.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCt                                   <  1:897377/101‑1 (MQ=11)


                                                                    ccccAAGGCGCCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTg                                  <  2:2238664/99‑1 (MQ=12)


                                                                    ccccAAAGCGTCCCGGCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTg                                  <  2:1675896/99‑1 (MQ=17)


                                                                    ccccAAAGCGCCCCGCCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTg                                  <  1:2127645/99‑1 (MQ=255)


                                                                     cccaaccccccccGGCCCGCCCCCCCCCCCGCCCCTGCCGGCCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTg                                  <  2:1578392/91‑1 (MQ=11)


                                                                     cccAAGGCGCCCCGCCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGc                                 <  2:4199125/100‑1 (MQ=11)


                                                                      ccAAGGCGCCCCGGCCGGCC.CCCCCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCa                                <  2:863011/101‑1 (MQ=11)


                                                                       cAAGGCGCCCCGCCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCAc                               <  2:4304078/101‑1 (MQ=11)


                                                                       cAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCAc                               >  1:363749/1‑101 (MQ=35)


                                                                        aaaGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACg                              >  1:2476097/1‑101 (MQ=37)


                                                                         aaGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCCGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGc                             >  2:2044433/1‑101 (MQ=38)


                                                                           gCGCCCCGGCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGccc                           <  1:1978043/101‑1 (MQ=255)


                                                                           gCGCCCCGGCCAGCC.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGccc                           <  1:1102389/101‑1 (MQ=255)


                                                                            ctccccGCCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGcccc                          <  1:4494379/98‑1 (MQ=255)


                                                                            cGTCCCGGCCCGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGcccc                          <  1:3887693/101‑1 (MQ=255)


                                                                            cGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGCAACGGGCCTGCACGcccc                          >  1:60243/1‑101 (MQ=255)


                                                                            cGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGcccc                          >  2:1525628/1‑101 (MQ=40)


                                                                              ccccGCCCGGCC.CCCCCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCt                        <  2:703211/100‑1 (MQ=14)


                                                                              ccccGCCCAGCC.CCCCCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCt                        <  1:3313710/100‑1 (MQ=255)


                                                                               cccGCCCGGCC.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTg                       <  2:3323934/101‑1 (MQ=255)


                                                                                ccGGCCGGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTgg                      <  1:1239633/101‑1 (MQ=255)


                                                                                 cGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGgc                     >  2:1328408/1‑101 (MQ=255)


                                                                                  cgcccggccccccccccgcCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGgc                     <  1:2444444/92‑1 (MQ=17)


                                                                                  cgcccggccccccccccgcCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGgc                     <  2:3447107/92‑1 (MQ=17)


                                                                                    ccAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCt                  >  2:2756195/1‑101 (MQ=255)


                                                                                    ccAGCG.CCCCCCCCGCCCCTGGCGGGCGCTTTTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCt                  <  1:1525737/101‑1 (MQ=255)


                                                                                     ccggcccccgccccgcCCCGGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCt                  <  1:3244657/95‑1 (MQ=255)


                                                                                     cAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTg                 >  1:3855184/1‑101 (MQ=255)


                                                                                     cAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTg                 >  1:931326/1‑101 (MQ=255)


                                                                                      cccccccccccccgcCCCTGGCGGGCCCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTg                 <  1:26607/96‑1 (MQ=255)


                                                                                       gcg.cCCGCCCCGCCCCTGGCGGGCGCTTCCCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGcc               <  2:308144/101‑1 (MQ=255)


                                                                                        ccccccgccccgcCCCTGGCGGGCCCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGcc               <  1:576544/98‑1 (MQ=255)


                                                                                         g.cccgcccCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcgg             <  1:519969/101‑1 (MQ=255)


                                                                                         g.cccgcccCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcgg             >  1:1683751/1‑101 (MQ=255)


                                                                                         ccccccccccgcCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcg              <  2:1037673/99‑1 (MQ=255)


                                                                                            ccgccccgccCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcgggc           >  2:3521086/1‑101 (MQ=255)


                                                                                            cccccccgccccTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcgggc           <  1:4486469/98‑1 (MQ=255)


                                                                                              cccccgccccTGGCGGCCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCcgggcgg         <  2:2105787/100‑1 (MQ=255)


                                                                                                cccgccccTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCgggg       >  1:3042009/1‑101 (MQ=255)


                                                                                                 ccgccccTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCGGGGa      >  1:2091959/1‑101 (MQ=255)


                                                                                                 ccgccccGGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCGGGGa      <  2:415804/101‑1 (MQ=255)


                                                                                                   gccccGGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCGGGGaaa    <  2:2431116/101‑1 (MQ=255)


TGAGCGGGAAGATTTGACCGAGGCCATCGCCGAGGTCATGTGACACAGCCGTCCCGGGACCGCCGGGGCGCCAAAGCGTCCCGGCCAGCG.CCCGCCCCGCCCCTGGCGGGCGCTTCTCGCCCGCCGGGCCGGGCGCCGGCCTCTGTTGTGCCTCGCGGAAACGGTCCTGCACGCCCCCTGGCGCTGCCGGGCGGGGAAAAG  >  NC_014034/2945021‑2945221

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 22 ≤


ATCG

< 31 ≤


ATCG

< 40 ≤


ATCG