BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1542725 =	228 (0.970)	2 (0.010)	2/198	38.6	0.01	coding (415/1002 nt)	RCAP_rcc01431	AraC family transcriptional regulator
*	?	NC_014034	3096942 =	225 (0.950)	2 (0.010)	2/198	38.6	0.01	coding (995/1095 nt)	RCAP_rcc02897	sensor histidine kinase
Rejected: Position hash score below cutoff.

Only 100 of 231 total aligned reads displayed.


TTCGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCAATGA  >  NC_014034/3096842‑3097042


ttCGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATggcgg                                                                                                      >  1:4672238/1‑101 (MQ=255)


ttCGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATggcgg                                                                                                      >  1:4448080/1‑101 (MQ=255)


 tCGGGCGGTTCTGGCGCGCAGAGGCCCCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGCCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATggcggc                                                                                                     <  1:4416225/101‑1 (MQ=255)


 tCGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATggcggc                                                                                                     >  2:2216005/1‑101 (MQ=255)


  cGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGgcggcg                                                                                                    >  1:1294255/1‑101 (MQ=255)


   gAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGgcggcgg                                                                                                   >  1:4161760/1‑100 (MQ=255)


    aGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGTAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAg                                                                                                  <  2:626056/101‑1 (MQ=255)


        gTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTTGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGgggc                                                                                              >  1:264538/1‑101 (MQ=255)


        gTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGGGgcgc                                                                                              >  1:1257428/1‑101 (MQ=255)


        gTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGgcgc                                                                                              >  2:2879907/1‑101 (MQ=255)


         ttCTGGCGCGCAGAGCCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCt                                                                                             <  2:3059989/101‑1 (MQ=255)


             ggCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCTCCCGCGCCCATGGCGGCGAGGCGCTGATc                                                                                         >  1:593375/1‑101 (MQ=255)


             ggCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATc                                                                                         <  2:1324841/101‑1 (MQ=255)


             ggCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATc                                                                                         <  1:1973058/101‑1 (MQ=255)


               cgcgcAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCt                                                                                       <  1:171043/101‑1 (MQ=255)


               cgcgcAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCt                                                                                       <  2:1137423/101‑1 (MQ=255)


               cgcgcAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCt                                                                                       <  2:350335/101‑1 (MQ=255)


                 cgcAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGc                                                                                     >  2:4552468/1‑101 (MQ=255)


                    agagGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTTCCCg                                                                                  >  1:1090018/1‑101 (MQ=255)


                     gagGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGccccc                                                                                 >  1:3214989/1‑99 (MQ=255)


                      agGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGAc                                                                                >  1:2422110/1‑101 (MQ=255)


                       ggCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACa                                                                               <  1:2837364/101‑1 (MQ=255)


                        gCCCCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAg                                                                              <  1:3042218/101‑1 (MQ=255)


                         ccTCGCGCGGGCGCAGCCTTGGCGGCTGGGGGCCGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGc                                                                             <  1:3970242/101‑1 (MQ=255)


                         ccTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCGATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGc                                                                             >  1:3922803/1‑101 (MQ=255)


                            ggcgcgGGCGCAGCCTTGGCGGCTCGGGTCTGGCCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGcccc                                                                          <  2:2732177/100‑1 (MQ=255)


                            cgcgcgGCCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGcccc                                                                          <  2:4253038/101‑1 (MQ=255)


                               gcgGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCggg                                                                       >  1:2951197/1‑101 (MQ=255)


                               gcgGGCGCAGCCTTGGCGGCTCGGCGCTGGCCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCggg                                                                       <  2:3769339/101‑1 (MQ=255)


                                 gggCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCt                                                                     >  2:3906033/1‑101 (MQ=255)


                                 gggCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCt                                                                     >  1:28526/1‑101 (MQ=255)


                                   gcgcAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCCGGCTGa                                                                   >  1:810006/1‑101 (MQ=255)


                                   gcgaggctttGCCGGCTCGGGGGTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGa                                                                   <  2:2016080/93‑1 (MQ=255)


                                    ctctgCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGAc                                                                  >  2:3761232/5‑101 (MQ=255)


                                    cgcAGCCTTGGTGTCTCGGCTCTGGCCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGAc                                                                  <  2:2356117/101‑1 (MQ=255)


                                    cgcAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGAc                                                                  <  1:4562376/101‑1 (MQ=255)


                                    cgcAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCCCGCCCATGGCGGCGAGGCCCTGATCCTGCCCGACAGCCCCGGGCCGAc                                                                  >  1:1441051/1‑101 (MQ=255)


                                     gcAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACg                                                                 >  1:729880/1‑101 (MQ=255)


                                      cAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACgg                                                                >  1:1462454/1‑101 (MQ=255)


                                      cAGCCTTGGCGGCTCGGGGCGGGCCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACgg                                                                <  1:2345869/101‑1 (MQ=255)


                                       aGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACggg                                                               >  2:4341316/1‑100 (MQ=255)


                                          cTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCCGGCTGACGGGGGa                                                            >  2:3453962/1‑101 (MQ=255)


                                           ttGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTggga                                                           >  2:154219/1‑99 (MQ=255)


                                            tGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGaaa                                                          >  2:3156041/1‑101 (MQ=255)


                                            tGGAGGTTCGGGGCTGGGCCTGCCCATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGCCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGaaa                                                          <  2:4669417/101‑1 (MQ=255)


                                               cggcTGGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATcc                                                       <  2:3262350/101‑1 (MQ=255)


                                                  cTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTc                                                    >  1:4255972/1‑101 (MQ=255)


                                                  cTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTc                                                    >  1:3769711/1‑101 (MQ=255)


                                                      gggCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgcc                                                >  1:1852368/1‑101 (MQ=255)


                                                      gggCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgcc                                                >  1:3338159/1‑101 (MQ=255)


                                                       ggCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccc                                               <  2:3231408/101‑1 (MQ=255)


                                                        gcggggCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGGGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccct                                              <  1:4314285/98‑1 (MQ=255)


                                                        gcggggCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccct                                              <  2:4577750/98‑1 (MQ=255)


                                                        gCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccct                                              >  1:1655805/1‑101 (MQ=255)


                                                        gCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccct                                              <  2:182001/101‑1 (MQ=255)


                                                          tGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccctgc                                            >  1:1504820/1‑101 (MQ=255)


                                                          tGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTctgccctgc                                            >  1:996043/1‑101 (MQ=255)


                                                             tcttGCCGATCGTGCGCGCCATCGCCCGCGCCCGTGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCATCTGCCCTGCCGc                                         <  1:4035759/98‑1 (MQ=255)


                                                                tGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATACGTCTGCCCTGCCGCaaa                                      >  2:3172960/1‑101 (MQ=255)


                                                                 gCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAg                                     >  2:4215526/1‑101 (MQ=255)


                                                                 gCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAg                                     >  2:3137419/1‑101 (MQ=255)


                                                                   cGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGtt                                   <  1:3622973/101‑1 (MQ=255)


                                                                   cGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGtt                                   <  2:2575434/101‑1 (MQ=255)


                                                                    gATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGCCTGCCCTGCCGCAAAGttt                                  >  2:4083010/1‑101 (MQ=255)


                                                                     aTCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTc                                 >  2:483002/1‑101 (MQ=255)


                                                                       cGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTccc                               <  2:729805/101‑1 (MQ=255)


                                                                       cGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTccc                               >  1:3100798/1‑101 (MQ=255)


                                                                        gTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCt                              <  1:2623772/101‑1 (MQ=255)


                                                                        gTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCt                              <  1:2216167/101‑1 (MQ=255)


                                                                        gTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCt                              >  2:4124758/1‑101 (MQ=255)


                                                                          gcgcgcCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCttt                            <  2:801266/101‑1 (MQ=255)


                                                                          gcgcgcCATCGCCCGCCCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCttt                            <  2:1369512/101‑1 (MQ=255)


                                                                           cgcgcCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTc                           <  1:4502851/101‑1 (MQ=255)


                                                                            gcgcCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCg                          <  1:1149559/101‑1 (MQ=255)


                                                                            gcgcCATCGCCCGCGCCCATGGCGGCCGGTCGCTTATCCTTCCCGACAGCCCCGGGCTGACGGCTTCAACCAGTCTGCCCTGCAGCAAACTTGTGCTTTCg                          >  2:1769663/1‑101 (MQ=255)


                                                                             cgcCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCgg                         <  2:25074/101‑1 (MQ=255)


                                                                                cATCGCCCGCCCCCATGGCGGCGAGGCCCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGc                      <  2:2030035/101‑1 (MQ=255)


                                                                                 aTCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCa                     <  1:1385886/101‑1 (MQ=255)


                                                                                  gcGCCCGGCCCCAGGGCGGCGAGGGGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCaa                    <  2:2143371/100‑1 (MQ=255)


                                                                                   cGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAg                   <  2:865203/101‑1 (MQ=255)


                                                                                   cGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAg                   <  1:2157138/101‑1 (MQ=255)


                                                                                    gCCCGCGCCCATGGCGGGGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGa                  <  2:4309568/101‑1 (MQ=255)


                                                                                    gCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGa                  <  2:4001643/101‑1 (MQ=255)


                                                                                      ccGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACt                <  2:1692020/101‑1 (MQ=255)


                                                                                      ccGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACt                <  1:4404923/101‑1 (MQ=255)


                                                                                       cgcgCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACtt               <  1:4569262/101‑1 (MQ=255)


                                                                                        gcgcCCATGGCGGCGAGGCGCTGATCCTTCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACttt              <  2:1089929/101‑1 (MQ=255)


                                                                                         cgcCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTtg             <  1:1902590/101‑1 (MQ=255)


                                                                                          gcCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTtga            <  1:3517528/101‑1 (MQ=255)


                                                                                           cccATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTtgat           <  1:3857190/101‑1 (MQ=255)


                                                                                           cccAGGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTtgat           <  1:2880123/101‑1 (MQ=255)


                                                                                            ccATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTtgatg          <  2:2948380/101‑1 (MQ=255)


                                                                                              aTGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGAc        <  1:3669621/101‑1 (MQ=255)


                                                                                                ggcggcGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCa      <  1:2746327/101‑1 (MQ=255)


                                                                                                ggcggcGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCa      >  2:3728181/1‑101 (MQ=255)


                                                                                                gacggcgAGGCGCTAATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCa      <  2:4615357/99‑1 (MQ=255)


                                                                                                 gcggggAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCaa     <  2:1462345/101‑1 (MQ=255)


                                                                                                  cggcgAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCAAt    <  2:3979966/101‑1 (MQ=255)


                                                                                                   ggcgAGGCCCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCAATg   <  2:4409962/101‑1 (MQ=255)


                                                                                                    gcgGGGCGCTGATCCTGCCCGACAGCCCCGGGCTAAGGCGGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCAATGa  <  2:2236387/101‑1 (MQ=255)


TTCGAGCGGTTCTGGCGCGCAGAGGCCTCGCGCGGGCGCAGCCTTGGCGGCTCGGGGCTGGGCCTGCCGATCGTGCGCGCCATCGCCCGCGCCCATGGCGGCGAGGCGCTGATCCTGCCCGACAGCCCCGGGCTGACGGTGGAAATCCGTCTGCCCTGCCGCAAAGTTTCCCTTTCGGAGCAAGACTTTGATGACCAATGA  >  NC_014034/3096842‑3097042

Base quality scores:


ATCG

< 3 ≤


ATCG

< 16 ≤


ATCG

< 24 ≤


ATCG

< 32 ≤


ATCG

< 41 ≤


ATCG