New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1543243208 (0.960)2 (0.010) 2/182 36.9 0.01 intergenic (‑104/‑349) RCAP_rcc01431/RCAP_rcc01432 AraC family transcriptional regulator/AraC family transcriptional regulator
?NC_014034 1963454 = 243 (1.020)coding (742/1824 nt) RCAP_rcc01816 family 5 extracellular solute‑binding protein
Rejected: Position hash score below cutoff.

Only 100 of 261 total aligned reads displayed.

CGGTAAAGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCGGG  >  NC_014034/1963354‑1963554
                                                                                                    |                                                                                                    
 ggTAAAGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTg                                                                                                     <  2:4670372/101‑1 (MQ=255)
 ggTAAAGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTg                                                                                                     >  2:4096593/1‑101 (MQ=255)
    aaaGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATc                                                                                                  <  2:4543893/101‑1 (MQ=255)
    aaaGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATc                                                                                                  >  2:1312940/1‑101 (MQ=255)
    aaaGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATc                                                                                                  >  1:946094/1‑101 (MQ=255)
          cGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGa                                                                                            >  1:4306151/1‑101 (MQ=255)
           gATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGAt                                                                                           >  1:2019603/1‑101 (MQ=255)
             tttCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATcc                                                                                         >  2:2231850/1‑101 (MQ=255)
               tCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCtt                                                                                       <  1:2159066/101‑1 (MQ=255)
                cGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTg                                                                                      >  2:2850554/1‑101 (MQ=255)
                 gCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGc                                                                                     >  1:33426/1‑101 (MQ=255)
                  ccGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGcc                                                                                    >  1:627866/1‑101 (MQ=255)
                  ccGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGcc                                                                                    <  2:3807290/101‑1 (MQ=255)
                    ggCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGcccc                                                                                  <  1:2986174/101‑1 (MQ=255)
                    ggCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGcccc                                                                                  <  1:937416/101‑1 (MQ=255)
                       cTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCccacc                                                                               <  1:1839465/101‑1 (MQ=255)
                         tGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAg                                                                             >  1:3237772/1‑101 (MQ=255)
                         tGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAg                                                                             <  2:1468182/101‑1 (MQ=255)
                         tGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAg                                                                             <  1:1756691/101‑1 (MQ=255)
                           aaGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTc                                                                           >  1:3593172/1‑101 (MQ=255)
                             ggCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCgg                                                                         <  2:946014/101‑1 (MQ=255)
                              gCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCggg                                                                        >  2:286529/1‑101 (MQ=255)
                                 tCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGAtt                                                                     <  2:3095880/101‑1 (MQ=255)
                                 tCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGAtt                                                                     <  2:2594572/101‑1 (MQ=255)
                                 tCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGAtt                                                                     <  1:2062174/101‑1 (MQ=255)
                                 tCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGAtt                                                                     <  2:235660/101‑1 (MQ=255)
                                  cGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTg                                                                    >  2:2100898/1‑101 (MQ=255)
                                   gAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTgc                                                                   >  1:2783925/1‑101 (MQ=255)
                                   gAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTgc                                                                   <  2:791499/101‑1 (MQ=255)
                                   gAACATCACGTTCTGATCGCCCAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTgc                                                                   <  1:3703955/101‑1 (MQ=255)
                                    aaCATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTgcg                                                                  <  2:2828611/101‑1 (MQ=255)
                                    aaCATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGACCGGCAGATCCTTGCCCCACCAGTCGGGATTgcg                                                                  >  2:1457188/1‑101 (MQ=255)
                                      cATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGcgcc                                                                >  2:3165686/1‑101 (MQ=255)
                                      cATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGcgcc                                                                <  1:585756/101‑1 (MQ=255)
                                      cATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGcgcc                                                                <  1:1210010/101‑1 (MQ=255)
                                        tCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGcgccgc                                                              <  2:3349708/101‑1 (MQ=255)
                                        tCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGcgccgc                                                              >  2:3396749/1‑101 (MQ=255)
                                         cACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCa                                                             <  1:4244663/101‑1 (MQ=255)
                                          aCGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCCTGCCCCACCAGTCGGGATTGCGCCGCaa                                                            >  2:65079/1‑101 (MQ=255)
                                          aCGGTCTGATCGCCGAAATGCTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCaa                                                            <  2:2904914/101‑1 (MQ=255)
                                           cGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAAt                                                           >  1:4642186/1‑101 (MQ=255)
                                            gTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAAtg                                                          <  1:1372841/101‑1 (MQ=255)
                                             ttCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAAtgt                                                         <  2:4570287/101‑1 (MQ=255)
                                                tGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGAt                                                      <  2:247524/101‑1 (MQ=255)
                                                 gATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATc                                                     <  1:4143173/101‑1 (MQ=255)
                                                  aTCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCg                                                    >  1:2864000/1‑101 (MQ=255)
                                                   tCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGa                                                   >  2:3940683/1‑101 (MQ=255)
                                                     gCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGAcc                                                 >  1:3999753/1‑101 (MQ=255)
                                                       cGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGAcctg                                               >  1:2304703/1‑99 (MQ=255)
                                                       cGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCgg                                               >  2:517371/1‑101 (MQ=255)
                                                       cGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCgg                                               >  2:3227509/1‑101 (MQ=255)
                                                         aaaTCCTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGcc                                             <  2:836546/101‑1 (MQ=255)
                                                            tACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCAt                                          <  1:4470387/101‑1 (MQ=255)
                                                             aCTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATg                                         <  2:3912224/101‑1 (MQ=255)
                                                             aCTCCCAGCTAAGCTAATCGAAATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATg                                         <  2:616788/101‑1 (MQ=255)
                                                              cTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCACATGt                                        <  1:24301/101‑1 (MQ=255)
                                                               tCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTc                                       <  1:249149/101‑1 (MQ=255)
                                                               tCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTc                                       <  2:4512875/101‑1 (MQ=255)
                                                                   agctcagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGAcc                                   >  2:1529474/1‑101 (MQ=255)
                                                                   agctcagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAAGTCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGAcc                                   <  2:3627929/101‑1 (MQ=255)
                                                                    gctcagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGTCCATGTCGACCt                                  <  1:2530425/101‑1 (MQ=255)
                                                                      tcagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTa                                >  2:3740741/1‑101 (MQ=255)
                                                                       cagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTAt                               >  1:3109894/1‑101 (MQ=255)
                                                                       cagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTAt                               <  2:1963593/101‑1 (MQ=255)
                                                                       cagctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTAt                               >  1:2205155/1‑101 (MQ=255)
                                                                        agctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATc                              >  2:4401509/1‑101 (MQ=255)
                                                                          gtGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCa                            <  1:65085/100‑1 (MQ=255)
                                                                          ctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCa                            <  2:2691778/101‑1 (MQ=255)
                                                                          ctGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCa                            <  1:1119111/101‑1 (MQ=255)
                                                                           tGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCAc                           >  1:474083/1‑101 (MQ=255)
                                                                              tCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGAc                        >  1:288773/1‑101 (MQ=255)
                                                                               cGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACa                       <  1:1471797/101‑1 (MQ=255)
                                                                               cGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACa                       >  1:1669440/1‑101 (MQ=255)
                                                                               cGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACa                       <  1:3457435/101‑1 (MQ=255)
                                                                                gagaTGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACAt                      >  2:1110697/1‑101 (MQ=255)
                                                                                gagaTGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACAt                      <  2:1233837/101‑1 (MQ=255)
                                                                                gagaTGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACAt                      <  1:3755149/101‑1 (MQ=255)
                                                                                 agaTGATGCAGCCCGCTGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATa                     >  1:4552524/1‑101 (MQ=255)
                                                                                 agaTGATGCAGCCCGCGGGTGATCGGTAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATa                     <  1:3916711/101‑1 (MQ=255)
                                                                                  gatgatGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAg                    <  2:3213936/101‑1 (MQ=255)
                                                                                  gatgatGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAg                    <  1:2232012/101‑1 (MQ=255)
                                                                                  gatgatGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAg                    <  2:2019463/101‑1 (MQ=255)
                                                                                   atgatgCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAgg                   >  1:155626/1‑101 (MQ=255)
                                                                                   atgatgCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAgg                   >  1:863807/1‑101 (MQ=255)
                                                                                    tgatgCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAggg                  <  1:3424278/101‑1 (MQ=255)
                                                                                    tgatgCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAggg                  <  1:870554/101‑1 (MQ=255)
                                                                                    tgatgCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAggg                  >  2:4142804/1‑101 (MQ=255)
                                                                                         cAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCgg             <  1:3397002/101‑1 (MQ=255)
                                                                                         cAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCgg             >  1:1230880/1‑101 (MQ=255)
                                                                                          tcttccgatctGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGa            <  1:3304611/91‑1 (MQ=255)
                                                                                           gCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAg           >  1:3821830/1‑101 (MQ=255)
                                                                                             ccGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGcc         <  1:3661685/101‑1 (MQ=255)
                                                                                               gcgGGTGATCGGCAGATTCTTGCCCGACGAGTCGGGAGTGCGCCGCAAGGTGGTCGAGCGGCCCAGGTGGAGATCGTCCACGACAGAGAGCCCGGCGCCCa       >  2:2646844/1‑101 (MQ=255)
                                                                                               gcgGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCa       <  1:805042/101‑1 (MQ=255)
                                                                                               gcgGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCa       >  1:458920/1‑101 (MQ=255)
                                                                                                 gggTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCAcc     <  2:1703521/101‑1 (MQ=255)
                                                                                                  ggTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCg    <  2:4324249/101‑1 (MQ=255)
                                                                                                  ggTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCg    >  1:1044946/1‑101 (MQ=255)
                                                                                                   gTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCgg   >  1:4070321/1‑101 (MQ=255)
                                                                                                    tGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCggg  <  1:4432974/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
CGGTAAAGGTCGATTTCGCCGGCCTTGAAGGCCTCGAACATCACGTTCTGATCGCCGAAATACTCCCAGCTCAGCTGATCGAGATGATGCAGCCCGCGGGTGATCGGCAGATCCTTGCCCCACCAGTCGGGATTGCGCCGCAATGTGATCGACCGGCCCATGTCGACCTTATCCACGACATAGGGCCCGGAGCCCACCGGG  >  NC_014034/1963354‑1963554

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG