New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1988023219 (0.990)2 (0.010) 2/186 37.3 0.01 coding (1087/1434 nt) glgA glycogen synthase
?NC_014034 = 3661533 241 (1.010)coding (384/2232 nt) RCAP_rcc03452 sensor histidine kinase/response regulator receiver protein
Rejected: Position hash score below cutoff.

Only 100 of 260 total aligned reads displayed.

AAACCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAGATGATCG  >  NC_014034/3661433‑3661633
                                                                                                    |                                                                                                    
aaaCCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCAcc                                                                                                      <  1:1918255/101‑1 (MQ=255)
aaaCCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCAcc                                                                                                      <  2:2675655/101‑1 (MQ=255)
 aaCCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACcg                                                                                                     <  2:641956/101‑1 (MQ=255)
 aaCCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACcg                                                                                                     >  2:1180923/1‑101 (MQ=255)
   ccATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACcgcg                                                                                                   >  1:2456130/1‑101 (MQ=255)
    cATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCgg                                                                                                  <  1:3393595/101‑1 (MQ=255)
    cATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCgg                                                                                                  <  1:865972/101‑1 (MQ=255)
     aTCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCggg                                                                                                 >  2:2710642/1‑101 (MQ=255)
      tCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGc                                                                                                >  2:2813643/1‑101 (MQ=255)
      tCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACAGCGGGc                                                                                                >  2:570334/1‑101 (MQ=255)
        cgcgACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGt                                                                                              <  1:2163664/101‑1 (MQ=255)
          cgACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCa                                                                                            >  2:2473788/1‑101 (MQ=255)
             cGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCGTGGCGAGGTGGCGATCACCGCGGGCGTCCccc                                                                                         >  1:4080422/1‑100 (MQ=255)
              ggCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTa                                                                                        >  1:2006652/1‑101 (MQ=255)
                cgttccGGTCTATGATGGCGATCTGAGGCTGGTGGTGTCGAAGCGGGCCTATCTGTCCTTCATTCATGGCGAGGTGGCGATCACCGCGGGCGGCACGTatg                                                                                      <  2:312578/96‑1 (MQ=255)
                cTTTGGGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCAACCCGGGCCTATCTGTCCTTCTTTCAGGGCGAGGTGGCGATCCCCGCGGGCGTCCCCTatg                                                                                      <  2:4071128/101‑1 (MQ=255)
                cTTTGCGGTCTATCATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCGGTCCTTCTTTCATAGCGAGGTGGCGATCACCGCGGGCGTCACCTagg                                                                                      <  2:3884714/101‑3 (MQ=255)
                 tttGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTatga                                                                                     >  1:1486126/1‑101 (MQ=255)
                  ttGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTatgat                                                                                    >  1:1168330/1‑101 (MQ=255)
                    gCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGc                                                                                  <  2:1976185/101‑1 (MQ=255)
                     cGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGGGATCACCGCGGGCGGCACCTATGATGcc                                                                                 >  1:3551094/1‑101 (MQ=255)
                     cGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGcc                                                                                 <  1:2439106/101‑1 (MQ=255)
                     cGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGcc                                                                                 <  2:3497349/101‑1 (MQ=255)
                        tCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTg                                                                              >  1:1948647/1‑101 (MQ=255)
                        tCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTg                                                                              >  1:1023177/1‑101 (MQ=255)
                         cTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGc                                                                             <  1:4531865/101‑1 (MQ=255)
                          tATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCt                                                                            >  1:3889065/1‑101 (MQ=255)
                           atgatgGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCta                                                                           >  2:1361415/1‑100 (MQ=255)
                            tgatgGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGa                                                                          <  1:228370/101‑1 (MQ=255)
                             gatgGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGaa                                                                         >  1:2701942/1‑101 (MQ=255)
                                 gCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGAtc                                                                     <  1:730571/101‑1 (MQ=255)
                                   gATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGAtcgt                                                                   <  2:3519784/101‑1 (MQ=255)
                                    aTCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCCCCTATGATGCCGTGCTGCAGAtcgtc                                                                  >  2:867606/1‑101 (MQ=255)
                                    aTCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGAtcgtc                                                                  <  1:1516928/101‑1 (MQ=255)
                                     tCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGAtcgtcg                                                                 <  2:3016708/101‑1 (MQ=255)
                                      cTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGc                                                                >  2:1136617/1‑101 (MQ=255)
                                      cTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGc                                                                <  1:2536960/101‑1 (MQ=255)
                                       tGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGcc                                                               <  2:4125858/101‑1 (MQ=255)
                                       tGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGcc                                                               >  1:1651020/1‑101 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            >  1:3650432/1‑101 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            <  2:4476398/101‑1 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            <  2:1085498/101‑1 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            >  2:4283431/1‑101 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            <  2:3246153/101‑1 (MQ=255)
                                          ggCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAg                                                            <  1:1543132/101‑1 (MQ=255)
                                             tggtggtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCAt                                                         >  2:360660/1‑101 (MQ=255)
                                              ggtggtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATg                                                        >  1:3609399/1‑101 (MQ=255)
                                                tggtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTAGCCAAGCATGaa                                                      <  1:3334053/101‑1 (MQ=255)
                                                 ggtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGaaa                                                     <  1:2193667/101‑1 (MQ=255)
                                                  gtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAAt                                                    >  1:2388011/1‑101 (MQ=255)
                                                  gtggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAAt                                                    >  1:4228303/1‑101 (MQ=255)
                                                    ggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATgg                                                  <  1:4383683/101‑1 (MQ=255)
                                                    ggCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATgg                                                  >  1:602956/1‑101 (MQ=255)
                                                       gAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCg                                               >  2:4377564/1‑101 (MQ=255)
                                                       gAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCCCCAAGCATGAAATGGTCg                                               >  2:2206209/1‑101 (MQ=255)
                                                            gggCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATg                                          <  1:3581537/101‑1 (MQ=255)
                                                             ggCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATgg                                         <  2:3397167/101‑1 (MQ=255)
                                                             ggCCTATCTGTCCTTCTTTCATGGCGAGGCGGCGATCACCCCGGGCGTCACCTATGATGCCGTGCTGAAGATCGGCGCCAAGCATGAAATGGTCAACATgg                                         >  1:1992445/1‑101 (MQ=255)
                                                               ccTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCg                                       >  1:1864166/1‑101 (MQ=255)
                                                                cTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCgg                                      >  1:1254554/1‑101 (MQ=255)
                                                                cTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCgg                                      >  1:3822743/1‑101 (MQ=255)
                                                                cTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCgg                                      >  1:1399/1‑101 (MQ=255)
                                                                cTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCgg                                      <  2:2896523/101‑1 (MQ=255)
                                                                 tATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCggg                                     >  1:1318547/1‑101 (MQ=255)
                                                                  aTCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGc                                    >  1:2610119/1‑101 (MQ=255)
                                                                  aTCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGc                                    >  2:4336339/1‑101 (MQ=255)
                                                                   tCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGcc                                   <  1:1238788/101‑1 (MQ=255)
                                                                     tGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTTAAGATCTTCGCCAAGCATGAAATGNTCGACCTGGCggggggc                                 >  2:1844693/1‑97 (MQ=255)
                                                                     tGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCAACATGGCGTGctcc                                 >  1:4638333/1‑98 (MQ=255)
                                                                        ccTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGAt                              <  2:877871/101‑1 (MQ=255)
                                                                           tcttTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGGCGCGACccc                           >  1:2933262/1‑100 (MQ=255)
                                                                             tttCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCt                         >  2:3450539/1‑101 (MQ=255)
                                                                              ttCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCAGGAAATGGTCGACATGGCGGGGCGCGAGCCCCTg                        >  1:3969683/1‑101 (MQ=255)
                                                                                cATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGGTCCCCTggg                      >  1:3084335/1‑100 (MQ=255)
                                                                                cATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGa                      <  2:3765530/101‑1 (MQ=255)
                                                                                  tGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACt                    <  1:1687475/101‑1 (MQ=255)
                                                                                  tGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCCCCGGACt                    >  1:4591438/1‑101 (MQ=255)
                                                                                   ggCGAGGTGGCGATCATCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGGCGCGGTCCCCTGGCCTg                   >  2:2299197/1‑101 (MQ=255)
                                                                                   ggCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTg                   <  1:500682/101‑1 (MQ=255)
                                                                                      gAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGca                <  1:2755625/101‑1 (MQ=255)
                                                                                       aGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGcac               <  1:4336631/101‑1 (MQ=255)
                                                                                          tGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGcaccac            <  2:1449462/101‑1 (MQ=255)
                                                                                           ggCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACg           <  2:1545178/101‑1 (MQ=255)
                                                                                            gCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGcaccacca          >  1:1297198/1‑99 (MQ=255)
                                                                                             cGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACgag         <  2:4064224/101‑1 (MQ=255)
                                                                                             cGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACgag         <  2:2698401/101‑1 (MQ=255)
                                                                                              gATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACgaga        <  2:3803741/101‑1 (MQ=255)
                                                                                              gATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACgaga        <  2:459433/101‑1 (MQ=255)
                                                                                              gATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCCCTGGACTGGGACCACgaga        >  2:1613579/1‑101 (MQ=255)
                                                                                              gATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCCCTGGACAGGcaccaccgga        >  2:768784/1‑97 (MQ=255)
                                                                                               aTCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACgagaa       >  1:4283183/1‑100 (MQ=255)
                                                                                               aTCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAgat       <  2:38903/101‑1 (MQ=255)
                                                                                               aTCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAgat       <  2:1061577/101‑1 (MQ=255)
                                                                                                 cACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAgatga     >  2:4002891/1‑101 (MQ=255)
                                                                                                  aCCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGGCTGGCACCCCGAgatgat    >  1:3179672/1‑101 (MQ=255)
                                                                                                  aCCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAgatgat    <  2:2441576/101‑1 (MQ=255)
                                                                                                   ccGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCGGCGGTACGCTTGACAGGGACCACgcgagaatc   >  2:4648801/1‑96 (MQ=255)
                                                                                                   ccGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAGATGATc   <  2:2359985/101‑1 (MQ=255)
                                                                                                    cgcgGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAGATGATCg  <  2:4083429/101‑1 (MQ=255)
                                                                                                    cgcgGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAGATGATCg  >  2:2401685/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
AAACCATCCGCGACGGCTTTGCGGTCTATGATGGCGATCTGCGGCTGGTGGTGGCGAACCGGGCCTATCTGTCCTTCTTTCATGGCGAGGTGGCGATCACCGCGGGCGTCACCTATGATGCCGTGCTGAAGATCGTCGCCAAGCATGAAATGGTCGACATGGCGGGCCGCGATCCGCTGGACTGGCACCACGAGATGATCG  >  NC_014034/3661433‑3661633

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG