New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1053750 =	NA (NA)	2 (0.010)	2/186	34.9	0.03	intergenic (‑520/‑60)	RCAP_rcc00957/RCAP_rcc00960	hypothetical protein/IS111A/IS1328/IS1533 family transposase/IS116/IS110/IS902 family transposase
	?	NC_014034	2096625 =	138 (0.610)					coding (371/807 nt)	RCAP_rcc01937	hypothetical protein
Rejected: Position hash score below cutoff.

CCAGAACACGGGCATCCGAAGTATGCTCAACCTTGGCCATAGCCGGTCTCCTCTGTGGTGTGGTTCGCAAAACCACCATAGAGACCTGAGCCCTGGTTATGGCCGCC....................................................................................................  <  NC_014034/1053849‑1053750 ....................................................................................................GGCCGCCGCGCCAGAAAGATCGCCCGCGCGGCAAAGAACCCGGGCGGGGCTTGCGCGTCGTGACGGTCGTGCAGGATCTTGTCGAACAGATGCGCCGCCCCGGGCCG  >  NC_014034/2096625‑2096731                                                                                                                                                                                                                                                       ATAGCCGGTCTCCTCTGTGGTGTGGTTCGCAAAACCACCATAGAGACCTGAGCCCTGGTTATGGCCGCCGCGCCAGAAAGATCGCCCGCGCGGCAAAGAAC                                                                      >  2:3607130/1‑101 (MQ=255)                                                                              ATAGAGACCTGAGCCCTGGTTATGGCCGCCGCGCCAGAAAGATCGCCCGCGCGGCAAAGAACCCGGGCGGGGCTTGCGCGTCGTGACGGTCGTGCAGGATC                               <  1:3607378/101‑1 (MQ=255)                                                                                                                                                                                                                 CCAGAACACGGGCATCCGAAGTATGCTCAACCTTGGCCATAGCCGGTCTCCTCTGTGGTGTGGTTCGCAAAACCACCATAGAGACCTGAGCCCTGGTTATGGCCGCC....................................................................................................  <  NC_014034/1053849‑1053750 ....................................................................................................GGCCGCCGCGCCAGAAAGATCGCCCGCGCGGCAAAGAACCCGGGCGGGGCTTGCGCGTCGTGACGGTCGTGCAGGATCTTGTCGAACAGATGCGCCGCCCCGGGCCG  >  NC_014034/2096625‑2096731 Base quality scores:  ATCG  < 3 ≤  ATCG  < 26 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG