New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1090383	200 (0.980)	2 (0.010)	2/180	34.3	0.01	coding (280/318 nt)	RCAP_rcc01009	hypothetical protein
	?	NC_014034	3161369 =	229 (1.010)					coding (453/873 nt)	atpG	ATP synthase F1 subunit gamma
Rejected: Position hash score below cutoff.

CCAGATCGTCAGGACGATAGACGCCGCGCCGATCACGTCCTCGATCATCTCGACAAGCCCGAAGCGATCCTCACCGCCCATGACCGGCCTCCGTCACCAGCGCCACCGG....................................................................................................  >  NC_014034/1090275‑1090383 ...................................................................................................GCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAGG  >  NC_014034/3161369‑3161468                                                                                                                                                                                                                                                             atctATCTCGACAAGCCCGAAGCGATCCTCACCGCCCATGACCGGCCTCCGTCACCAGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATG                                                                    <  1:565560/97‑1 (MQ=255)                                               ATCTCGACAAGCCCGAAGCGATCCTCACCGCCCATGACCGGCCTCCGTCACCAGCGCCACCGGGCAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGAGAT                                                                >  2:565508/1‑101 (MQ=255)                                                                                                                                                                                                                   CCAGATCGTCAGGACGATAGACGCCGCGCCGATCACGTCCTCGATCATCTCGACAAGCCCGAAGCGATCCTCACCGCCCATGACCGGCCTCCGTCACCAGCGCCACCGG....................................................................................................  >  NC_014034/1090275‑1090383 ...................................................................................................GCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAGG  >  NC_014034/3161369‑3161468 Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 19 ≤  ATCG  < 29 ≤  ATCG  < 38 ≤  ATCG