New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1090383200 (0.980)2 (0.010) 2/180 34.3 0.01 coding (280/318 nt) RCAP_rcc01009 hypothetical protein
?NC_014034 3161369 = 229 (1.010)coding (453/873 nt) atpG ATP synthase F1 subunit gamma
Rejected: Position hash score below cutoff.

Only 100 of 251 total aligned reads displayed.

TGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAGGA  >  NC_014034/3161269‑3161469
                                                                                                    |                                                                                                    
 gATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGt                                                                                                     >  2:3005869/1‑101 (MQ=255)
  aTCCCGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTa                                                                                                    <  1:55914/101‑1 (MQ=255)
   tCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAg                                                                                                   <  1:2950730/101‑1 (MQ=255)
       gCTCTGGACGACCGAGAAGAAGATCGTCCCCACCTCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCa                                                                                               <  2:4441097/101‑1 (MQ=255)
            ggAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTttc                                                                                          >  2:1955885/1‑101 (MQ=255)
             gAAGACCGAGAAGAAGATCGTCCCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTttct                                                                                         <  2:483063/101‑1 (MQ=255)
              aaGACCGAGAAGAAGATCGCCCCCCCATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTttctt                                                                                        <  2:176977/101‑1 (MQ=255)
               aGACCGAAAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTttcttc                                                                                       <  1:391934/101‑1 (MQ=255)
                acccGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCa                                                                                      <  2:3405378/99‑1 (MQ=255)
                 aCCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCAc                                                                                     >  1:1923371/1‑101 (MQ=255)
                  ccGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACg                                                                                    >  1:2512303/1‑101 (MQ=255)
                         gaagaTCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCa                                                                             <  1:843320/101‑1 (MQ=255)
                          aagtTCGTCGCCACATCGTTTTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAg                                                                            <  1:72159/101‑1 (MQ=255)
                          aagaTCGTCCCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAg                                                                            <  2:3362486/101‑1 (MQ=255)
                           agaTCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAgg                                                                           <  2:363870/101‑1 (MQ=255)
                            gaTCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGt                                                                          >  2:213919/1‑101 (MQ=255)
                            gaTCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGt                                                                          >  1:2794491/1‑101 (MQ=255)
                             aTCGTCCCCACATCGTTTTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTc                                                                         <  2:1601439/101‑1 (MQ=255)
                             aTCGCCGCCCCATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTc                                                                         <  2:1923030/101‑1 (MQ=255)
                               cgtcgCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGa                                                                       >  2:2007668/1‑101 (MQ=255)
                               cgtcgCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGa                                                                       <  2:3291434/101‑1 (MQ=255)
                                gtcgCCACATCTTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGAt                                                                      <  1:1151378/101‑1 (MQ=255)
                                gtcgCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGAt                                                                      >  2:1334298/1‑101 (MQ=255)
                                gtcgCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGAt                                                                      >  1:2856398/1‑101 (MQ=255)
                                   gCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGAtgtg                                                                   >  1:1891279/1‑101 (MQ=255)
                                   gCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGAtgtg                                                                   >  2:1532235/1‑101 (MQ=255)
                                    ccACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGa                                                                  >  2:3036429/1‑101 (MQ=255)
                                    ccACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCCGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGa                                                                  >  1:2770559/1‑101 (MQ=255)
                                     cacaTCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCGGGTCGATGTGAt                                                                 <  1:2422371/101‑1 (MQ=255)
                                     cacaTCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGAt                                                                 >  2:4111636/1‑101 (MQ=255)
                                     cacaTCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGAt                                                                 <  1:1532340/101‑1 (MQ=255)
                                      acaTCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATc                                                                <  1:1835811/101‑1 (MQ=255)
                                            tATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTa                                                          >  1:3532480/1‑101 (MQ=255)
                                               tCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATa                                                       >  1:3318428/1‑101 (MQ=255)
                                               tCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATa                                                       <  1:2448407/101‑1 (MQ=255)
                                                 gcccgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACt                                                     <  2:2449472/101‑1 (MQ=255)
                                                  cccgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTg                                                    <  1:1406968/101‑1 (MQ=255)
                                                  cccgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTg                                                    <  1:3362450/101‑1 (MQ=255)
                                                   ccgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTgg                                                   >  1:2366520/1‑101 (MQ=255)
                                                   ccgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTgg                                                   >  2:1191839/1‑101 (MQ=255)
                                                    cgccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGc                                                  >  2:1189760/1‑101 (MQ=255)
                                                     gccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGcc                                                 >  2:1664491/1‑101 (MQ=255)
                                                     ccttCGAAGCTGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGcc                                                 <  2:2794285/98‑1 (MQ=255)
                                                      ccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGccc                                                >  2:3873870/1‑101 (MQ=255)
                                                      ccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGccc                                                >  2:3677059/1‑101 (MQ=255)
                                                      ccTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGccc                                                <  1:96953/101‑1 (MQ=255)
                                                       cTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCa                                               <  2:3318196/101‑1 (MQ=255)
                                                        tCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCTCAg                                              <  2:3773614/101‑1 (MQ=255)
                                                        tCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAg                                              <  2:516614/101‑1 (MQ=255)
                                                          gAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGAt                                            <  2:1868379/101‑1 (MQ=255)
                                                           aaGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATc                                           <  1:524964/101‑1 (MQ=255)
                                                            aGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCa                                          <  2:1283381/101‑1 (MQ=255)
                                                             gCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCac                                         <  2:803672/101‑1 (MQ=255)
                                                             gCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCac                                         <  2:1465459/101‑1 (MQ=255)
                                                             gCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCac                                         >  1:4175117/1‑101 (MQ=255)
                                                               ggTCGATGATGTTTTGCGAAATCTTCTGCGCCAGCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacga                                       <  1:3872912/101‑1 (MQ=255)
                                                               ggTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacga                                       >  2:2556084/1‑101 (MQ=255)
                                                               ggTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacga                                       >  1:1011791/1‑101 (MQ=255)
                                                               ggTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacga                                       >  1:2288742/1‑101 (MQ=255)
                                                                gTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacgac                                      <  2:3486501/101‑1 (MQ=255)
                                                                gTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacgac                                      <  2:2856190/101‑1 (MQ=255)
                                                                 tCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCacgacg                                     >  1:2093460/1‑101 (MQ=255)
                                                                    atgatgTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAg                                  >  1:4448046/1‑101 (MQ=255)
                                                                     tgatgTTTTGCGAAATCTTCTGCGCCACCGGGTAGTTCAGTTTCTTCACGTCGCTCAGGTTGATGTGATCGATGTATTACTGGCCCAGATCACGACGCAgc                                 >  2:2988513/1‑101 (MQ=255)
                                                                     tgatgTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAgc                                 <  1:2604614/101‑1 (MQ=255)
                                                                     tgatgTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAgc                                 >  1:3260531/1‑101 (MQ=255)
                                                                      gatgTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAgcg                                <  2:4369370/101‑1 (MQ=255)
                                                                        tgTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGcgcg                              <  1:1776125/101‑1 (MQ=255)
                                                                         gTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGt                             >  2:1506288/1‑101 (MQ=255)
                                                                          ttttGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTc                            >  1:2908911/1‑101 (MQ=255)
                                                                          ttttGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTc                            <  2:3593588/101‑1 (MQ=255)
                                                                            ttGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTcgc                          >  1:4224322/1‑101 (MQ=255)
                                                                            ttGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTcgc                          >  1:4063403/1‑101 (MQ=255)
                                                                              gCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGa                        <  1:3667046/101‑1 (MQ=255)
                                                                                gAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGAcc                      >  1:755833/1‑101 (MQ=255)
                                                                                   aTCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCttt                   <  2:3142531/101‑1 (MQ=255)
                                                                                   aTCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCttt                   <  1:3622405/101‑1 (MQ=255)
                                                                                      ttctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCtt                >  1:338075/1‑101 (MQ=255)
                                                                                      ttctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCtt                <  1:2007797/101‑1 (MQ=255)
                                                                                      ttctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCtt                <  1:1963653/101‑1 (MQ=255)
                                                                                      ttctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGAGatcggaaga                >  1:2191749/1‑93 (MQ=255)
                                                                                       tctGCGGCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTg               >  1:829232/1‑101 (MQ=255)
                                                                                        ctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGc              <  1:3144295/101‑1 (MQ=255)
                                                                                        ctGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGc              >  1:4371087/1‑101 (MQ=255)
                                                                                          gcgcCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCg            <  2:1575814/101‑1 (MQ=255)
                                                                                            gcCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGAc          <  2:3260299/101‑1 (MQ=255)
                                                                                             ccACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACg         <  2:2512140/101‑1 (MQ=255)
                                                                                              cACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACgg        >  1:2484591/1‑101 (MQ=255)
                                                                                              cACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACgg        <  1:881847/101‑1 (MQ=255)
                                                                                              cACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACgg        >  2:1973633/1‑101 (MQ=255)
                                                                                               aCCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGt       >  2:4039752/1‑101 (MQ=255)
                                                                                                ccGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATGACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTg      >  1:3813801/1‑101 (MQ=255)
                                                                                                ccGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTg      <  2:2302975/101‑1 (MQ=255)
                                                                                                 cGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGa     <  1:2988734/101‑1 (MQ=255)
                                                                                                 cGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGa     <  1:2146124/101‑1 (MQ=255)
                                                                                                 cGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGa     >  1:3790898/1‑101 (MQ=255)
                                                                                                 cGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGa     >  1:997544/1‑101 (MQ=255)
                                                                                                   ggTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAgg   >  2:2078781/1‑101 (MQ=255)
                                                                                                   ggTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAg  >  2:2770201/1‑100 (MQ=255)
                                                                                                    gTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAGGa  >  1:3203770/1‑101 (MQ=255)
                                                                                                    |                                                                                                    
TGATCACGCTCTGGAAGACCGAGAAGAAGATCGTCGCCACATCGTATTCGCCCGCCTCGAAGCGGTCGATGATGTTTTGCGAAATCTTCTGCGCCACCGGGTAGCTCAGTTTCTTCACGTCGCTCAGGTCGATGTGATCGATGTAATACTGGCCCAGATCACGACGCAGCGCGTCGCGACCTTTCTTGCCGACGGTGAGGA  >  NC_014034/3161269‑3161469

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG