New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 703031	209 (0.990)	2 (0.010)	2/186	34.9	0.01	coding (2191/2811 nt)	RCAP_rcc00643	diguanylate cyclase/phosphodiesterase
	?	NC_014034	= 2747751	122 (0.540)					intergenic (‑83/+210)	RCAP_rcc02553/RCAP_rcc02554	hypothetical protein/NmrA family protein
Rejected: Position hash score below cutoff.

CCCAGTCCTGCGCCGCAAGGCTGGAGGCGGTCTGGTTGATCGACAAGGTCCAGTCGGCATGCACCAGCCCCGCCCAGCGCCAGCGCGCCTGCACCGCCACCGCCCG....................................................................................................  >  NC_014034/702926‑703031 ...................................................................................................CCGCCCGAACCCCATGCCGCTTTTGCCCCATGCCCTGCCGGTTCCAAGGTTTGACCAAACCGGCCGCCCATGCCACAGATGGGGGATCAGATGGAGGACCCGATGCC  <  NC_014034/2747751‑2747652                                                                                                                                                                                                                                                                TCCAGTCGGCATGCACCAGCCCCGCCCAGCGCCAGCGCGCCTGCACCGCCACCGCCCGAACCCCATGCCGCTTTTGCCCCATGCCCTGCCGGTTCCAAGGT                                                           >  1:3167757/1‑101 (MQ=255)                                                       CGGCATGCACCAGCCCCGCCCAGCGCCAGCGCGCCTGCACCGCCACCGCCCGAACCCCATGCCGCTTTTGCCCCATGCCCTGCCGGTTCCAAGGTTTGACC                                                     <  2:3167530/101‑1 (MQ=255)                                                                                                                                                                                                                CCCAGTCCTGCGCCGCAAGGCTGGAGGCGGTCTGGTTGATCGACAAGGTCCAGTCGGCATGCACCAGCCCCGCCCAGCGCCAGCGCGCCTGCACCGCCACCGCCCG....................................................................................................  >  NC_014034/702926‑703031 ...................................................................................................CCGCCCGAACCCCATGCCGCTTTTGCCCCATGCCCTGCCGGTTCCAAGGTTTGACCAAACCGGCCGCCCATGCCACAGATGGGGGATCAGATGGAGGACCCGATGCC  <  NC_014034/2747751‑2747652 Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG