BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 703031	209 (0.990)	2 (0.010)	2/186	34.9	0.01	coding (2191/2811 nt)	RCAP_rcc00643	diguanylate cyclase/phosphodiesterase
*	?	NC_014034	= 2747751	122 (0.540)	2 (0.010)	2/186	34.9	0.01	intergenic (‑83/+210)	RCAP_rcc02553/RCAP_rcc02554	hypothetical protein/NmrA family protein
Rejected: Position hash score below cutoff.

Only 100 of 142 total aligned reads displayed.


GGCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCGCCCGGCCCG  >  NC_014034/2747652‑2747850


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATTGGGTTc                                                                                                       >  1:741987/1‑101 (MQ=255)


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTc                                                                                                       <  2:22915/101‑1 (MQ=255)


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTc                                                                                                       <  1:1374010/101‑1 (MQ=255)


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTc                                                                                                       <  1:2013968/101‑1 (MQ=255)


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTc                                                                                                       <  1:984482/101‑1 (MQ=255)


ggCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTc                                                                                                       <  2:4107879/101‑1 (MQ=255)


 gCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCg                                                                                                      >  1:2395453/1‑101 (MQ=255)


 gCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCg                                                                                                      <  2:3703293/101‑1 (MQ=255)


  cATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGGTCgg                                                                                                     >  1:3519975/1‑101 (MQ=255)


   aTCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCggg                                                                                                    >  1:1905009/1‑101 (MQ=255)


   aTCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCggg                                                                                                    >  1:4306943/1‑101 (MQ=255)


   aTCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCggg                                                                                                    >  2:2697009/1‑101 (MQ=255)


   aTCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCggg                                                                                                    <  2:2736306/101‑1 (MQ=255)


    tCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGc                                                                                                   <  1:1803766/101‑1 (MQ=255)


      gggTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCgg                                                                                                 <  1:1869763/101‑1 (MQ=255)


       ggTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.a                                                                                               <  1:1818779/101‑1 (MQ=255)


        gTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.aa                                                                                              >  2:179842/1‑101 (MQ=255)


        gTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.aa                                                                                              >  1:3037234/1‑101 (MQ=255)


         tcctccATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AAt                                                                                             <  2:4238464/101‑1 (MQ=255)


         tcctccATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATCGGGCAAAAGCGGCATGGGGTTCGGGCGG.AAt                                                                                             >  2:545404/1‑101 (MQ=255)


          cctccATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATa                                                                                            <  2:859763/101‑1 (MQ=255)


           ctccATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAg                                                                                           <  1:1529307/101‑1 (MQ=255)


            tccATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTTGGGCGG.AATAgg                                                                                          >  2:3762383/1‑101 (MQ=255)


              cctCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGaa                                                                                        <  1:909496/99‑1 (MQ=255)


              cATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGaa                                                                                        <  1:4423859/101‑1 (MQ=255)


              cATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGaa                                                                                        <  2:3035134/101‑1 (MQ=255)


              cATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGaa                                                                                        <  1:2288654/101‑1 (MQ=255)


               aTCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGaaa                                                                                       >  1:1179373/1‑101 (MQ=255)


                  tGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.cgc                                                                                   <  2:3113047/101‑1 (MQ=255)


                   gATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGGAA.cgcg                                                                                  >  2:1064348/1‑101 (MQ=255)


                     tCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGAc                                                                                <  1:3585209/101‑1 (MQ=255)


                      cccccATCTGTGGCATGGGCGGCCGGTTTGGTCAAGCCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGAcc                                                                               <  1:939253/101‑1 (MQ=255)


                      cccccATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGAcc                                                                               >  2:3237380/1‑101 (MQ=255)


                        cccATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCcg                                                                             <  1:3214302/101‑1 (MQ=255)


                        cccATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCcg                                                                             <  1:4069548/101‑1 (MQ=255)


                        cccATCTGTGGCATGCGCGGCCGGTTTGGACAACCGTT.GGAACCGGAAGGGCATGCGGCAAAAGCGGCATGGGGTTCGGGCTG.AATAGAAAA.CGCGACCcg                                                                             <  2:1754659/101‑1 (MQ=255)


                         ccATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCcgc                                                                            <  1:72591/101‑1 (MQ=255)


                          cATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCcgcg                                                                           <  1:2750028/101‑1 (MQ=255)


                           aTCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGt                                                                          >  1:310408/1‑101 (MQ=255)


                           aTCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGt                                                                          <  1:1821714/101‑1 (MQ=255)


                           aTCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGt                                                                          >  1:1432426/1‑101 (MQ=255)


                             cTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGttt                                                                        <  1:3379571/101‑1 (MQ=255)


                                 ggCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.cccc                                                                   <  1:844535/101‑1 (MQ=255)


                                 ggCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.cccc                                                                   <  2:1065566/101‑1 (MQ=255)


                                 ggCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.cccc                                                                   <  1:19605/101‑1 (MQ=255)


                                   cATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.Ccccgc                                                                 <  2:2838784/101‑1 (MQ=255)


                                              gttttGGTCAAACCTT.GGACCCGGAAGGGCATGGGGCAAAAGCGGCTTGGGGTTCGGGCGA.AATAGAAAA.CCCCACCCTCCTTT.CCCCGCCCGCAGAGccc                                                      <  2:159337/99‑1 (MQ=255)


                                              ggTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGccc                                                      <  2:984751/101‑1 (MQ=255)


                                               gTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCg                                                     >  2:3255854/1‑101 (MQ=255)


                                                tttGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCgg                                                    >  2:956701/1‑101 (MQ=255)


                                                 ttGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGt                                                   >  1:512774/1‑101 (MQ=255)


                                                  tGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGtt                                                  >  1:4133493/1‑101 (MQ=255)


                                                  tGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGtt                                                  >  2:1223327/1‑101 (MQ=255)


                                                  tGGTAAAACCTG.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGtt                                                  <  2:3320201/101‑1 (MQ=255)


                                                    ggtaaaCCTTGGGACCCGGCGGGGCATGGGGAAAAGGGGGCA.GGGGTTCGGGGGGAAAGAGAAAC.CGCGCCCCCCTTTC.CCCCGCCCGCAGCGCCCGGTTg                                                 <  2:3099826/98‑1 (MQ=255)


                                                       aacccTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGc                                             <  2:3879474/98‑1 (MQ=255)


                                                       aaaCCTT.GGAACCGGCAGGGCGTGGGGCAAAAGCGGCATGGTGTTCGGGCGG.AATAGGAAC.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGc                                             <  2:4423187/101‑1 (MQ=255)


                                                       aaaCCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGc                                             <  1:2682135/101‑1 (MQ=255)


                                                       aaaCCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGc                                             >  2:360425/1‑101 (MQ=255)


                                                        acccTG.GGACCCGGCAGGGCATGGGGCAAAAGCGGCAGGGGGTTCGGGCGG.AATAGGAAC.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCa                                            <  2:4363755/99‑1 (MQ=37)


                                                           cTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTC.CCCCGCCCGCAGCGCCCGGTTGCGGCATGa                                         <  2:2490817/101‑1 (MQ=255)


                                                             t.GGAACCGGCGGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGAcc                                       <  2:1904885/101‑1 (MQ=255)


                                                               ggAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCg                                      >  1:1802911/1‑101 (MQ=255)


                                                                 aaCCGGGAGGGCAGGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCt                                    <  1:3303247/101‑1 (MQ=255)


                                                                  acgggCGGGGCATGGGGCAAAAGGGGCAGGGGGTTGGGGGGG.AATAGGAAC.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCtt                                   <  1:4060705/98‑1 (MQ=37)


                                                                  aCCGGCAGGGCAGGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCtt                                   <  2:3350605/101‑1 (MQ=255)


                                                                  aCCGGCAGGCCATGGGGAAAAAGCGGTATGGGGTTCGGGCGA.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCtt                                   <  2:1925906/101‑1 (MQ=38)


                                                                    cGGGAGGGAAGGGGACAAAGGCGGGGGGGGGTGGGGGGGA.AATAAGACA.CCCGCCCCCCTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCa                                 <  1:3762636/101‑1 (MQ=255)


                                                                    cGGCGGGGCATGGGGAAAAAGCGGCATGGGTTTGGGGCGA.AATAGGAAC.CGCGCCCCGCTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCa                                 <  1:2244037/101‑1 (MQ=255)


                                                                    cGGCGGGGCAGGGGGCAAAGGGGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCGTTC.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCa                                 <  1:2697199/101‑1 (MQ=255)


                                                                     ggCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAg                                >  2:3913367/1‑101 (MQ=255)


                                                                      gcggggCATGGGGAAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGc                               <  2:199723/98‑1 (MQ=255)


                                                                       gaGGGCATGGGGAAAAAGCGGCATGGGGTTGGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGcc                              <  2:3899882/100‑1 (MQ=255)


                                                                        ggggCATGGGGCAAAAGAGGCATGGGCTTCGGGCGA.AATAGTAAG.CGCGACCCACGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGccc                             <  2:741907/100‑1 (MQ=255)


                                                                        aGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGccc                             >  2:702628/1‑101 (MQ=255)


                                                                        aGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGccc                             >  2:3982544/1‑101 (MQ=255)


                                                                          ggCAGGGGACAAAAGCGGCAGGGGGTTCGGGCGG.AATAGGAAC.CGCGACCCGCGTTC.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGc                           <  2:4306674/101‑1 (MQ=255)


                                                                           gcgtGGGGCAAAGGCGGCAGGGGGTTCGGGCGG.AATAGAAAA.CGCGCCCCGGTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGca                          <  1:4057325/98‑1 (MQ=255)


                                                                           gCATGGGGCAAAAGCGGCATGGGGTTCGGGCGA.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGca                          <  1:4215647/101‑1 (MQ=255)


                                                                           gCATGGGCCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGca                          <  2:1432319/101‑1 (MQ=255)


                                                                             aTGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGcacc                        <  2:2802617/101‑1 (MQ=255)


                                                                              tGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGcacca                       >  2:3181594/1‑101 (MQ=255)


                                                                              tGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGcacca                       >  1:188410/1‑101 (MQ=255)


                                                                               ggggCAAAGGGGGCTGGGGGGTCGGGGGA.AACGAGAAC.CCCCCCCCGCGTTC.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGcaccac                      <  1:3841811/101‑1 (MQ=255)


                                                                                   gaaaaGGGGGATGGGGTTCGGGGGGAAATAGAAAC.CGCCCCCCGCTTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACaga                   <  1:1790729/100‑1 (MQ=255)


                                                                                    aaaaGCGGCAGGGGGTTGGGGCGG.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAgg                 <  1:360460/101‑1 (MQ=255)


                                                                                     aaaGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAggg                >  1:3069176/1‑101 (MQ=255)


                                                                                      aaGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGc               <  2:1376904/101‑1 (MQ=255)


                                                                                      aaGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGc               >  1:754296/1‑101 (MQ=255)


                                                                                       aggggCAGGGGGTTGGGGCGG.AAGAGGAAC.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCa              <  1:4339170/98‑1 (MQ=38)


                                                                                       aGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCa              <  1:956786/101‑1 (MQ=255)


                                                                                         gggCATGTGTTTCGGGCGG.AATAGGAAC.CGCGGCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAgc            <  2:2244940/100‑1 (MQ=38)


                                                                                         gggCAGGGGGTTCGGGCGG.AAGAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAgc            <  1:2058415/100‑1 (MQ=255)


                                                                                          gggggggggGTGGGGGGG.AAAAAGAAACCGCG.CCCGTGTTTCCCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAgg            <  2:3041255/96‑2 (MQ=255)


                                                                                            cATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCgcc         >  1:1698183/1‑101 (MQ=255)


                                                                                              tGGGGTTCGGGGGG.AATAGAAAC.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCgcccg       <  1:1064436/101‑1 (MQ=39)


                                                                                               ggggTTCGGGCGG.AATAGGAAA.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCgcccgg      <  1:2085817/101‑1 (MQ=255)


                                                                                                 ggTTCGGGCGG.AATGGGAAC.CCGGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCgcccggcc    <  2:1741468/101‑1 (MQ=39)


                                                                                                  gTTCGGGCGG.AATAGGAAC.CGCGCCCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGAGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCgcccggccc   <  1:1276197/101‑1 (MQ=255)


                                                                                                   ttCGGGCGG.AATAGAAAA.CGCGGCCCGCGTCT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGCCCGCTTCAGCCCGCACCACAGAGGGCAGCgcccggcccg  <  2:754216/101‑1 (MQ=255)


GGCATCGGGTCCTCCATCTGATCCCCCATCTGTGGCATGGGCGGCCGGTTTGGTCAAACCTT.GGAACCGGCAGGGCATGGGGCAAAAGCGGCATGGGGTTCGGGCGG.AATAGGAAA.CGCGACCCGCGTTT.CCCCGCCCGCAGCGCCCGGTTGCGGCATGACCGCTTCAGCCCGCACCACAGAGGGCAGCGCCCGGCCCG  >  NC_014034/2747652‑2747850

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG