New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1562015143 (0.690)89 (0.430) 49/184 9.8 0.53 intergenic (+209/+11) RCAP_rcc01445/RCAP_rcc01446 tonB‑dependent receptor/M20 family peptidase
?NC_014034 1608059 = 15 (0.070)intergenic (+329/‑18) RCAP_rcc01484/murD hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Rejected: Position hash score below cutoff.

Only 100 of 157 total aligned reads displayed.

CCGGGGCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGA  >  NC_014034/1561916‑1562114
                                                                                                           |                                                                                                   
 cGGGGCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGGGT.GAAA..CCCcc..gccg                                                                                                   >  1:1932833/1‑101 (MQ=255)
 cGGGGCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGGGCGGGGGGGT.GAAA..CCCcc..gccg                                                                                                   >  1:1599540/1‑101 (MQ=255)
  ggggCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCcc..gccgc                                                                                                  >  1:2303763/1‑101 (MQ=255)
   gggCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCcc..gccgcc                                                                                                 >  1:1123866/1‑101 (MQ=255)
   gggCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCcc..gccgcc                                                                                                 >  1:1972892/1‑101 (MQ=255)
    ggCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCcc..gccgccg                                                                                                >  1:3332651/1‑101 (MQ=255)
     gCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCc..gccgccgc                                                                                               >  1:532447/1‑101 (MQ=255)
     gCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCc..gccgccgc                                                                                               >  2:122750/1‑101 (MQ=255)
       aaaGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGccc                                                                                             >  1:2388860/1‑101 (MQ=255)
       aaaGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGccc                                                                                             >  2:82888/1‑101 (MQ=255)
          gggCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGt                                                                                          >  2:2254933/1‑101 (MQ=255)
            gCAGGGAAAAGGGG.CCCCGGAT.CCGAGCCCCCTTTTTTTTTATCTTGCCTAAAATACCCCGGGGGGGTGGGGGGGTGT.GAAC..CCCCC..GCCGCCGCCCGGTc                                                                                         <  2:2056655/101‑1 (MQ=255)
             cAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAg                                                                                       >  2:3454380/1‑101 (MQ=255)
             cAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAg                                                                                       >  2:1012177/1‑101 (MQ=255)
              aGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGc                                                                                      >  1:3027909/1‑101 (MQ=255)
                ggAAAA.GGGCCCCCCGAT.CCGGGCGCCTTTTTTTTTTTTTTTCCCAAAAATCCCCCGGGGGGGGGGGGGGGTGG.AAAC..CCCCC..GCCGCCGCCCGGTCAGcc                                                                                     <  1:4110870/101‑1 (MQ=255)
                ggAAAA.GGG.CCCCCCCCCCCGACCCCCTTTTGCTTTTATCTTCCCCCAAATACCCCGGGGGGGTGGGGGGGTTT.AAAC..CCCCC..GCCGCCGCCCGGTCAGcc                                                                                     <  2:3243856/101‑1 (MQ=255)
                 gAAAA.GGGCCCCCCGAC.CCGGGCGCCTTTTGTTTTTATCTTGCCTAAAATACCCCGGGGGGGGGGGGGGGTGT.AAAC..CCCCC..GCCGCCGCCCGGTCAGccc                                                                                    <  2:341156/101‑1 (MQ=255)
                 gAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcg                                                                                   >  2:3235058/1‑101 (MQ=255)
                  aaaa.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcgc                                                                                  >  2:4130526/1‑101 (MQ=255)
                  aaaa.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcgc                                                                                  >  1:320313/1‑101 (MQ=255)
                  aaaa.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcgc                                                                                  >  2:1859590/1‑101 (MQ=255)
                   aaa.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcgcg                                                                                 >  1:1235533/1‑101 (MQ=255)
                   aaa.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCcgcg                                                                                 >  1:2514118/1‑101 (MQ=255)
                     a.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGAt                                                                               >  1:364602/1‑101 (MQ=255)
                        gg.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGc                                                                             >  1:4325918/1‑101 (MQ=255)
                        gg.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGGGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGACGc                                                                             >  2:2847612/1‑101 (MQ=255)
                               cGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGTTGCGGGGGGGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCa                                                                       >  2:297244/1‑101 (MQ=255)
                               cGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCa                                                                       >  1:1807010/1‑101 (MQ=255)
                               cGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCa                                                                       >  2:3591005/1‑101 (MQ=255)
                                gAT.CGGAGCCCCTTTTTTTTTTTTCTTGCCTAAAATCCCCCGGGGGGGGGGGGGGGGGT.AAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAg                                                                      <  1:669901/101‑1 (MQ=255)
                                gAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAg                                                                      >  1:1187246/1‑101 (MQ=255)
                                 aT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGa                                                                     >  1:3463155/1‑101 (MQ=255)
                                  t.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGCGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCGCGGTCAGCCCGCGATGCGGTCCAGaa                                                                    >  1:2692817/1‑101 (MQ=255)
                                    ccGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAAt                                                                   >  2:3677905/1‑101 (MQ=255)
                                      gggcgcCCTTTGCTTTTATCTTGCCTAAAATATCCCGGGGGGGTGCGGGGGTGT.GAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                 <  2:2742038/99‑1 (MQ=38)
                                      gAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                 >  2:3014660/1‑101 (MQ=255)
                                      gAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                 >  1:2011393/1‑101 (MQ=255)
                                      gAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGACCGCGATGCGGTCCAGAATcc                                                                 >  2:1748596/1‑101 (MQ=255)
                                       aGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCcg                                                                >  1:438247/1‑101 (MQ=255)
                                        gcgcCTTTTTTTTTTATCTTGCCTAAAATACCCCGGGGGGGGGGGGGGGTGG.AAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCcgc                                                               <  1:2116518/101‑1 (MQ=255)
                                          gcCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCgcgc                                                             >  1:2595808/1‑101 (MQ=255)
                                           cccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGcc                                                            >  1:3447959/1‑101 (MQ=255)
                                           cccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCCcc                                                            >  1:1722109/1‑101 (MQ=255)
                                             ttttttttttATCTTCCCTAAAATCCCCCGCGGGGGTGGGGGGGTGT.GAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCa                                                          <  1:2215323/95‑1 (MQ=255)
                                             ttttctttttCTTTTGCCCCAAATTCCCCGCGGGGGGGCGGGGGGGT.GAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCa                                                          <  2:2011449/95‑1 (MQ=255)
                                              tttGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGCCAGCCCGCGATGCGGTCCAGAATCCGCGCCCac                                                         >  1:3829236/1‑100 (MQ=255)
                                                tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                       >  1:4418251/1‑101 (MQ=255)
                                                  tttttATCTCGCCTAAAATCCCCCGCGGGGGGGCGGGGGTGA.AAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGc                                                     <  2:4417979/100‑1 (MQ=255)
                                                    tttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCgg                                                   >  1:1285496/1‑101 (MQ=255)
                                                    tttATCTTGCC.CAAAAACCCCCCGGGGGGGGGGGGGGTT.GAAA..CCCCCCGGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCg                                                    <  1:4127451/101‑1 (MQ=255)
                                                     ttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGa                                                  >  2:1443435/1‑101 (MQ=255)
                                                     ttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGa                                                  >  1:861667/1‑101 (MQ=255)
                                                      tatggtGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                 >  2:3769152/6‑101 (MQ=255)
                                                      tATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                 >  2:3814190/1‑101 (MQ=255)
                                                      tATCTGCCCTAAAATACCCCCGGGGGGGGGGGGGGTGT.GAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                 <  1:2699337/101‑1 (MQ=255)
                                                       aTCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGG.GAAA..CCCCC..CCCGCCGCCCGCTCAGCCCGCGCTGCGGCCCAGAACCCCCGCCCAGCTGccgccc                                                >  1:810052/1‑96 (MQ=25)
                                                        tCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGc                                               >  1:462339/1‑101 (MQ=255)
                                                         cTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGcc                                              >  1:4407234/1‑101 (MQ=255)
                                                          ttGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGccc                                             >  1:1417249/1‑101 (MQ=255)
                                                          ttGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGccc                                             >  1:4243344/1‑101 (MQ=255)
                                                          ttGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGccc                                             >  2:111107/1‑101 (MQ=255)
                                                          ttGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCAGCCCGGTCAGCACGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGccc                                             >  1:1437340/1‑101 (MQ=255)
                                                          ctGCCTCAAATTACCCACGGGGG.GCGGGGGGGTGGAAAC.CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGcc                                              <  2:1325196/100‑1 (MQ=255)
                                                           tGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCt                                            >  2:3091843/1‑101 (MQ=255)
                                                           tGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCt                                            >  2:1139385/1‑101 (MQ=255)
                                                            cccTCAAATCCCCCGGGGGGGGGGGGGGGTGT.AAAC..CCCCC..CCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCtt                                           <  1:2076309/100‑1 (MQ=255)
                                                                cAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTgg                                       >  1:2216911/1‑101 (MQ=255)
                                                                cAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGACCTTGTgg                                       >  2:1824424/1‑101 (MQ=255)
                                                                   accgccggggggggggggggggggA.GACC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAg                                    <  1:297279/92‑1 (MQ=255)
                                                                    tatCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGc                                   >  1:3998530/1‑101 (MQ=255)
                                                                     ccccggggggggggggggggtgT.AACC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGct                                  <  1:3371163/94‑1 (MQ=255)
                                                                        ccgggggggggggggggtgG.AAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCtctc                               <  1:2961584/97‑1 (MQ=255)
                                                                        ccACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCtctc                               >  2:3872675/1‑101 (MQ=255)
                                                                         cACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCa                              >  1:3661189/1‑101 (MQ=255)
                                                                         cACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCa                              >  1:4059379/1‑101 (MQ=255)
                                                                           ggggggtgggggggtgT.GCAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGTGGATGCCCTTGTGGAAGCTCTCAAg                            <  1:641183/100‑1 (MQ=255)
                                                                           ggggggggggggggtgT.AACC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAg                            <  1:2595062/100‑1 (MQ=255)
                                                                           cgggggtgcgggggggT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAg                            >  2:4394273/1‑101 (MQ=255)
                                                                            gggggtgcgggggtgT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAgg                           >  2:4068886/1‑101 (MQ=255)
                                                                            gggggtgcgggggtgT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAgg                           >  1:3201872/1‑101 (MQ=255)
                                                                             ggggtgggggggtgC.GACC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGt                          <  2:1972763/101‑1 (MQ=255)
                                                                                gtgcgggggtgT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCat                       >  1:1912495/1‑101 (MQ=255)
                                                                                 tgcgggggtgT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCata                      >  1:1012471/1‑101 (MQ=255)
                                                                                 ggggggggtgT.GAAC..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCata                      <  2:501347/98‑1 (MQ=255)
                                                                                 ggggggggggT.GAAACCCCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCa                        <  2:3394125/98‑1 (MQ=255)
                                                                                     ggggtgT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtc                  >  1:3532462/1‑101 (MQ=255)
                                                                                         tgt.gAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGt              >  1:910691/1‑101 (MQ=255)
                                                                                          gt.gAAA..CCCCC..GCCGCCTCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt             >  1:3856977/1‑101 (MQ=255)
                                                                                          ggtggacccccccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtctc                <  2:2513955/92‑1 (MQ=255)
                                                                                            tgtaaccccccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGt              <  1:4234772/94‑1 (MQ=255)
                                                                                             gAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCg           >  1:1302909/1‑101 (MQ=255)
                                                                                             ccccccccccc..CCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCCCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt             <  1:3769405/95‑1 (MQ=255)
                                                                                              caaacccccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTc            <  2:2529247/96‑1 (MQ=255)
                                                                                                aacccccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg          <  2:4243075/98‑1 (MQ=255)
                                                                                                  cccccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGc        <  2:63951/100‑1 (MQ=255)
                                                                                                    cccc..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtg      >  2:3993594/1‑101 (MQ=255)
                                                                                                      cc..gccgccgCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgtg    >  1:2153556/1‑101 (MQ=255)
                                                                                                      cc..gccgccgCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgtg    <  1:4126423/101‑1 (MQ=255)
                                                                                                          gccgccgccCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGa  >  1:3701933/1‑101 (MQ=255)
                                                                                                           |                                                                                                   
CCGGGGCAAAGGGCAGGGAAAA.GGG.CGCCCGAT.CCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGT.GAAA..CCCCC..GCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGA  >  NC_014034/1561916‑1562114

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG