BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408396 =	161 (0.720)	21 (0.090)	5/198	32.7	0.15	intergenic (+14/+134)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	1640007 =	80 (0.350)	21 (0.090)	5/198	32.7	0.15	intergenic (+87/‑58)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 164 total aligned reads displayed.


TTCACCGCGATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG  >  NC_014034/408296‑408497


ttCACCGCGATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGctc                                                                                                            >  2:271925/1‑101 (MQ=255)


 tCACCGCGATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGctct                                                                                                           <  1:3352239/101‑1 (MQ=255)


     cgcgATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGccc                                                                                                       <  1:3008835/101‑1 (MQ=255)


       cgATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGccccc                                                                                                     >  1:1114046/1‑101 (MQ=255)


        tctCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCa                                                                                                    <  1:2054867/99‑1 (MQ=255)


        gATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCa                                                                                                    >  2:1348493/1‑101 (MQ=255)


         aTCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAg                                                                                                   <  2:3212811/101‑1 (MQ=255)


           cAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCaaga                                                                                                 >  2:2054730/1‑98 (MQ=255)


           cAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.c                                                                                                <  2:3860811/101‑1 (MQ=255)


             aGGCGGCGGAGCACGGCCGCGGCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.ccc                                                                                              <  2:2884707/101‑1 (MQ=255)


               gcggcgGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.ccccc                                                                                            <  1:54553/101‑1 (MQ=255)


               gcagcggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.ccccc                                                                                            <  2:250224/98‑1 (MQ=255)


                gggcggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCg                                                                                           <  1:4293044/100‑1 (MQ=255)


                 ggcggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGGTTGCCCCCCGC.CCCCCgg                                                                                          >  1:1896949/1‑101 (MQ=255)


                 ggcggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCgg                                                                                          <  1:2613885/101‑1 (MQ=255)


                  gcggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCggg                                                                                         <  1:1767021/101‑1 (MQ=255)


                   cggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGa                                                                                        <  1:1454384/101‑1 (MQ=255)


                    ggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCTGGGGGGGCCGGCCCCCACC.CCCCCGGGa                                                                                        >  1:174180/1‑101 (MQ=255)


                    ggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGGCTGCCCCCCCA.cccccccggg                                                                                       >  1:388593/1‑96 (MQ=255)


                    ggAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGat                                                                                       <  1:2770126/101‑1 (MQ=255)


                      aGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGat.at                                                                                    <  1:4037680/101‑1 (MQ=255)


                        cACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.Attt                                                                                  >  2:1206828/1‑101 (MQ=255)


                          cGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGc                                                                                <  1:3235662/101‑1 (MQ=255)


                           ggCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.g                                                                              <  2:1352138/101‑1 (MQ=255)


                             ccGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGc                                                                            <  2:1452109/101‑1 (MQ=255)


                             ccGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGc                                                                            <  2:1777743/101‑1 (MQ=255)


                                cgTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGGCTGCCCCCCCA.CCCCCCGGGA.Atttttggcgag                                                                          >  1:2252048/1‑93 (MQ=255)


                                 gTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGGCTGTCCCCCGA.CCCCCGCGGT.Attttttcccagt                                                                         >  2:4188665/1‑92 (MQ=255)


                                   cGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCCGA.CCCCCGGGAT.ATTTGC.GGCAAGATg                                                                      >  2:2889606/1‑101 (MQ=255)


                                   cGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATg                                                                      <  2:1698169/101‑1 (MQ=255)


                                    gCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGa                                                                     <  1:729910/101‑1 (MQ=255)


                                     nccGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGaa                                                                    <  1:2438009/100‑1 (MQ=255)


                                     cccGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGaa                                                                    <  1:456632/101‑1 (MQ=255)


                                      ccGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAg                                                                   <  2:766097/101‑1 (MQ=255)


                                       cGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.c                                                                 <  1:4378519/101‑1 (MQ=255)


                                        gCTGGATCGCAGATGTGGATTACGCGCTCTATCGGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.cc                                                                <  1:3817989/101‑1 (MQ=255)


                                         cTGGATCGCAGATGTGGATTACGCGCTCTATCTGCTCAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCg                                                               <  2:4438470/101‑1 (MQ=255)


                                         cTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCg                                                               <  2:2215124/101‑1 (MQ=255)


                                         cTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCg                                                               >  2:4434744/1‑101 (MQ=255)


                                         cTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCg                                                               >  1:2685182/1‑101 (MQ=255)


                                          tGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGa                                                              >  2:4087606/1‑101 (MQ=255)


                                            gATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATg                                                            <  2:3178959/101‑1 (MQ=255)


                                            gATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATg                                                            <  2:4026711/101‑1 (MQ=255)


                                             aTCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGt                                                           <  2:1778327/101‑1 (MQ=255)


                                               cGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGTCTGCCCCCCCA.CCCCCCGGGA.ATTTTT.GGGAAGATGAAG.cccagggcc                                                         >  2:1234903/1‑94 (MQ=255)


                                                gCAGATGTGGATTACGCGCTCTATCTGCGCAACGTCTGAGAGGCT.GGGGGGGCTGCCCCCCGA.CCCCCCGGGG.ATTTTC.GGGAAGAGGAAG.ACGAGGTCCt                                                        >  2:1210381/1‑101 (MQ=255)


                                                gCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCt                                                        >  1:3045348/1‑101 (MQ=255)


                                                gCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCt                                                        <  1:1922478/101‑1 (MQ=255)


                                                 cAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCtt                                                       <  1:3456403/101‑1 (MQ=255)


                                                 cAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCtt                                                       >  1:3200493/1‑101 (MQ=255)


                                                 cAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCtt                                                       <  2:2071061/101‑1 (MQ=255)


                                                 cAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCGCTGCCCCCCGA.CCCCCCCGGG.ATTTGT.CGCAAGATGAAA.ACCATGTCCtt                                                       >  1:1586950/1‑101 (MQ=21)


                                                  aGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTc                                                      <  2:4179760/101‑1 (MQ=255)


                                                  aGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTc                                                      <  1:3474273/101‑1 (MQ=255)


                                                  aGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTc                                                      <  2:3002200/101‑1 (MQ=255)


                                                    aTGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGTCTGGCCCCCGA.ACCCCCGGAG.ATTTGT.GGGAAGAAAAAG.GCGAAGTCCTTCAt                                                    >  2:1101360/1‑101 (MQ=255)


                                                    aTGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCAt                                                    <  2:890571/101‑1 (MQ=255)


                                                    aTGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCAt                                                    <  1:117277/101‑1 (MQ=255)


                                                        ggATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGGCTGCCCCCCGACCCCCCGGGAG.ATTTTC.GGCAAAATGAAA.CCGAGTGCCTTCCTCtt                                                 >  2:1554027/1‑101 (MQ=255)


                                                        ggATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTg                                                <  1:1336377/101‑1 (MQ=255)


                                                           ttACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCg                                             <  2:4063829/101‑1 (MQ=255)


                                                             aCGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGGTCTGCCCCCCGC.CCCCCGGGGG.ATTTTC.GGGAAGAAGGAG.ACGGGGTCCTTCCTCTTGGCGCa                                           >  2:2018687/1‑101 (MQ=255)


                                                             aCGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCa                                           <  2:74810/101‑1 (MQ=255)


                                                               gcgcTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCaaa                                         <  1:1259940/101‑1 (MQ=255)


                                                                cgcTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAa.t                                       <  1:4051240/101‑1 (MQ=255)


                                                                cgcTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAa.t                                       <  2:2283491/101‑1 (MQ=255)


                                                                 gcTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAa.ta                                      >  2:3801380/1‑101 (MQ=255)


                                                                  ctctATCTGCACAACGTCTGAGAGGCT.GGGGGGTCTGCCCCCAGA.CCCCCCGGGT.ATTTGT.GGCCAGAGGAAG.CCGCTGGCCTTCCTCTTGcccccaaaat                                      >  1:4222291/1‑93 (MQ=255)


                                                                  ctctATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCCGA.CCCCCCGGGT.ATTTGC.GGCCAGATGAAG.CCGATGTCCTTCATCTTGCCGCCAa.tat                                     >  1:4430998/1‑101 (MQ=37)


                                                                   tctATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATc                                    <  2:2308011/101‑1 (MQ=255)


                                                                     tATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTTCCCCCCCA.CCCCCCGGGT.ATTTTT.TGCGAGATGAAG.CCGATGTCCCTTATCGTGCCTCCAA.TATgcc                                  >  2:407547/1‑101 (MQ=255)


                                                                     tATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATccc                                  <  1:2889814/101‑1 (MQ=255)


                                                                     tATCTGCACAACGTCTGAGAGGCG.GGGGGCTCTGCCCCCAGA.CCCCCGGGAC.ATTTGC.TGATAGATGCAA.ACCATGGCCCTCATCTTTCCGCAAA.TATcca                                  >  1:1474363/1‑100 (MQ=21)


                                                                         tGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCgggg                              <  1:3728361/101‑1 (MQ=255)


                                                                           cacaACGTCTGAGAGGCT.GGGGGGTCTGCCCCCCGA.CCCCCCGGGT.ATTTTC.GGGAAGATGAAG.CCGATGTCCTTCATCTTTCCGCAAA.AATACCcggggg                            >  1:4425992/1‑101 (MQ=255)


                                                                            acaACGTCTGAGAGGCT.GGGGGGGCTGCCCCCCGA.CCCCCCGGGG.ATTTTCAGGCAA.AGGAAG.CCGCCGAGCTTAATTTTGTCGTCAA.TCTACCggggggg                           >  2:559216/1‑100 (MQ=255)


                                                                            acaACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGa                           <  1:3422896/101‑1 (MQ=255)


                                                                              aaCGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTTC.GGGAAGAAGAAA.CCGATGTCCTTCCTCTTTCCCCAAA.AATCCCCGGGGGGgg                         >  1:1064446/1‑101 (MQ=21)


                                                                                 gTCGGAGAGGCG.GGGGCCCCTCCCCCCAGC.CCCCGGGAAT.ATTTGC.GCAAAGA.GAAGCCCGTTGCCCTTCATCTTCCCGAAAA.TATCCCGGGGGGAGGCtt                      <  2:1606979/101‑1 (MQ=12)


                                                                                  tCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTg                     <  1:271960/101‑1 (MQ=255)


                                                                                   cTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGc                    <  2:1113955/101‑1 (MQ=255)


                                                                                    tGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCCGGGT.ATTTTC.GGCAAGATGAAA.CCGATGTCCTTTCTCTTTTCGCCAA.TATTCCCGGGGGGGGGTTGCt                   >  2:2287991/1‑101 (MQ=16)


                                                                                     gagaGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTg                  <  1:4087866/101‑1 (MQ=255)


                                                                                      agagGCT.GGGGGGTCTGCCCCCCGA.CCCCCCGGGT.ATTTTC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCCAA.AATCCCCGGGGGAGGGTTGCTGa                 >  2:4227161/1‑101 (MQ=25)


                                                                                        agGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGaaa               >  1:1442422/1‑101 (MQ=255)


                                                                                          gCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGGTAATTTGG.GGCAGGAGAAAC.CCGAT.TTCTTCATCCTTCCCCAAATTATCCCGGGGGGCGGCTGGCGGaaac              >  2:3192627/1‑100 (MQ=9)


                                                                                          gCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGc             >  1:3941320/1‑101 (MQ=255)


                                                                                            t.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaa           >  2:1888375/1‑101 (MQ=255)


                                                                                            t.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaa           >  2:4414898/1‑101 (MQ=255)


                                                                                            t.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.ACGATGTACTTCATCTTGCAGCAAA.TATCCCGGGGGGAGGCATGCTGGAAGCaa           >  2:3495352/1‑101 (MQ=25)


                                                                                             gggggcCCCTCCCCCCAGA.CCCCGGGTAT.TTTGGG.GGCAAGAGAAAG.CCGATTTCCTTCATTTTGCCGAAAA.TTTCCCGGGGGGAGGCTTGCTGAAAGCaa           <  1:1026399/100‑1 (MQ=255)


                                                                                              gggggCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaag          >  1:2490310/1‑100 (MQ=255)


                                                                                                gggCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCaagac        <  2:3045127/101‑4 (MQ=255)


                                                                                                gggCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAACCaagac        >  1:1322724/1‑98 (MQ=255)


                                                                                                 ggCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGGAAGAaaaaag       >  1:2353833/1‑98 (MQ=255)


                                                                                                   ctctGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggg    >  2:2963218/1‑101 (MQ=255)


                                                                                                   ctctGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggg    >  1:626754/1‑101 (MQ=255)


                                                                                                    tctGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACgggg   >  2:2515327/1‑101 (MQ=255)


                                                                                                     ctGCCCCCAGC.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg  <  2:1872354/101‑1 (MQ=255)


                                                                                                     ctGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGC.AAGACggggg  >  1:386994/1‑101 (MQ=255)


TTCACCGCGATCAAGGCGGCGGAGCACGGCCGCGTCGCCCGCTGGATCGCAGATGTGGATTACGCGCTCTATCTGCACAACGTCTGAGAGGCT.GGGGGCTCTGCCCCCAGA.CCCCCGGGAT.ATTTGC.GGCAAGATGAAG.CCGATGTCCTTCATCTTGCCGCAAA.TATCCCGGGGGGAGGCTTGCTGAAAGCAAAGACGGGGG  >  NC_014034/408296‑408497

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG