New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2287727	NA (NA)	35 (0.260)	12/120	17.9	0.45	intergenic (‑124/+111)	RCAP_rcc02125/acsA1	hypothetical protein/acetate‑‑CoA ligase
	?	NC_014034	= 2490466	87 (0.380)					intergenic (‑79/+13)	soxD/soxB	sarcosine oxidase subunit delta/sarcosine oxidase subunit beta
Rejected: Position hash score below cutoff.

CCGGCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC..GGGGGTTTCACACCCCCGCACCCCCGTGGCGTAGTTGCGCCAGGAAAAAGCACAG.ACTTTTGCCCGTTCACCCTGGC.GCAAATCTCCCGGG  >  NC_014034/2287634‑2287789                                                                                                |                                                                 ccGGCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC..GGGGGGTTTTCCCCCCCCCCCCCCCCCGGCgggggt                                                           >  1:2545908/1‑96 (MQ=1)    gCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGCGGGGGGGTTTCACCCCCCCCCCCCCCCGGggggggttcg                                                          >  1:1181599/1‑93 (MQ=1)                                      ccGTTGCTCTTGACCCGCCCGTAGCGGC..GGGGGGTTTACCCCCCCCCCCCCCCCCCGGGGGGGTTCGCCCGGGAAAAACACCGAACTTTTCCCCGTCCAcc                      >  1:2464993/1‑101 (MQ=0)                                        gTTGCTCTTGACCCGCCCGTAGCGGC..GGGGGGTTTTCACCCCCCCCCCCCCCCGGCGGGGGTGCGCCCGGGAAAAAAACAC.ACCTTTTTCCCCTCAccccc                   >  1:471638/1‑99 (MQ=0)                                                 gACCCGCCCGTAGCGGC..GGGGGGTTTACACCCCCCCCCCCCCCCGGCGGAGGTGCGCCCGGAAAAAACACAG.ACTTTTTCCCCTTCACCCCCGC.GCcaaac         >  1:3313878/1‑99 (MQ=0)                                                        ccgTAGCGGC..GGGGGGTTTACACCCCCCCCCCCCCCCGGCGGGGGTGTGGCCGGAAAAAAAACAC.ACTTTTTCCCGTTCACCCCCGCACCCAATCTCCCgg   >  2:3928484/1‑101 (MQ=0)                                                         cgTAGCGGCG.GGGGGTTTCAACCCCCCCCCCCCCCCGGGGGCGGTGGGGCCGGGAAAAAAAACAA.ACTTTTGCCCGTTCACCCCGGG.CGAAACTTCCCggg  >  2:3713932/1‑101 (MQ=0)                                                                                                |                                                                 CCGGCTTGCGCGGCGCGGTTTGGCCGTGTTGCCCCGGCCGTTGCTCTTGACCCGCCCGTAGCGGC..GGGGGTTTCACACCCCCGCACCCCCGTGGCGTAGTTGCGCCAGGAAAAAGCACAG.ACTTTTGCCCGTTCACCCTGGC.GCAAATCTCCCGGG  >  NC_014034/2287634‑2287789 Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG