New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2600952 =	0 (0.000)	55 (0.250)	11/192	27.2	0.39	intergenic (+14/‑127)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
	?	NC_014034	3003969 =	173 (0.770)					intergenic (+15/+161)	gfo/lrp	glucose‑‑fructose oxidoreductase/leucine‑responsive regulatory protein
Rejected: Position hash score below cutoff.

GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAATC  >  NC_014034/2600856‑2601051                                                                                                 |                                                                                                    gggCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGctgcc                                                                                                 >  1:2975436/1‑97 (MQ=255)      cgcTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGctgccccccc                                                                                            >  1:1551736/1‑92 (MQ=255)                                                                                        gggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGGGCAGc          >  2:3519532/10‑101 (MQ=255)                                                                                        gggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGc          <  1:2008294/92‑1 (MQ=255)                                                                                        gggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGc          >  1:2444409/10‑101 (MQ=255)                                                                                        gggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCCTGTTTGGCTGGGGCGCCGc          >  1:2748334/10‑101 (MQ=255)                                                                                        ggccgccccccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGc          <  1:2221309/92‑1 (MQ=255)                                                                                        gcgcggcccccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGc          <  2:3422221/92‑1 (MQ=255)                                                                                         ggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGGGGGGCAGCg         >  2:1875840/9‑101 (MQ=255)                                                                                         ggcagcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCg         >  1:1727956/9‑101 (MQ=255)                                                                                         gccgccccccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCg         <  2:2691244/93‑1 (MQ=255)                                                                                            gccccccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACCCCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCt      <  1:3488826/96‑1 (MQ=255)                                                                                            agcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCt      >  2:1376722/6‑101 (MQ=255)                                                                                            agcgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCt      >  2:1564365/6‑101 (MQ=255)                                                                                             gcccccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTa     <  1:2707709/97‑1 (MQ=255)                                                                                              cgcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTaa    <  1:638728/98‑1 (MQ=255)                                                                                              cgcccccGGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTaa    <  1:4318304/98‑1 (MQ=255)                                                                                               gcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGGGGCGCAGCGGCTAAt   >  2:1110383/3‑101 (MQ=255)                                                                                               gcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAAt   >  2:4209195/3‑101 (MQ=255)                                                                                               gcccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAAt   >  1:4130125/3‑101 (MQ=255)                                                                                                cccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAATc  <  2:732125/100‑1 (MQ=255)                                                                                                cccccTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAATc  >  1:1446566/2‑101 (MQ=255)                                                                                                 |                                                                                                    GGGCGCGCTTCTTCCCGTCCGAGGACCGCACGCCGCTGATCGATTGCCGCGACGAAGCGAAACGCCTTCTTGCCGAGATCTGACGGACGGGGGGGGCCCCTGCCCCGCCGGATCCGGGGCGGACCGGGTCCGCAAGGGCACACCTGCGCGCCAAGTGCAGCGGCTTGCTTGTTTGGCTGCGGCGCAGCGGCTAATC  >  NC_014034/2600856‑2601051 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG