New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2697776 =200 (0.960)2 (0.010) 2/184 23.6 0.01 coding (642/1128 nt) RCAP_rcc02512 hypothetical protein
?NC_014035 56693 = 117 (0.890)coding (490/822 nt) nosY cooper ABC transporter permease NosY
Rejected: Position hash score below cutoff.

Only 100 of 221 total aligned reads displayed.

GCGGCGACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTGTCGG  >  NC_014034/2697676‑2697876
                                                                                                    |                                                                                                    
gcggcgACTCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTc                                                                                                      <  2:4416137/101‑1 (MQ=255)
gcggcgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTc                                                                                                      >  2:4290350/1‑101 (MQ=255)
 cggcgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTcg                                                                                                     <  2:934485/101‑1 (MQ=255)
  ggcgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTcgc                                                                                                    >  1:3914721/1‑101 (MQ=255)
   gcgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTcgcg                                                                                                   <  1:2257377/101‑1 (MQ=255)
   gcgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTcgcg                                                                                                   <  2:313228/101‑1 (MQ=255)
    cgACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCgg                                                                                                  >  2:1095997/1‑101 (MQ=255)
     gACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCggg                                                                                                 <  2:1188581/101‑1 (MQ=255)
      aCGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGc                                                                                                >  2:5154/1‑101 (MQ=255)
       cGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGcc                                                                                               >  2:2387565/1‑101 (MQ=255)
        gCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCg                                                                                              >  1:420702/1‑101 (MQ=255)
         ccTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCgg                                                                                             >  1:3301314/1‑101 (MQ=255)
           tATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGTTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGt                                                                                           <  2:1126541/101‑1 (MQ=255)
           tATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGt                                                                                           <  1:3614391/101‑1 (MQ=255)
           tATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGt                                                                                           >  2:3509592/1‑101 (MQ=255)
           tATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGt                                                                                           >  2:2582443/1‑101 (MQ=255)
           tATTACGAGACCGAACAGGTCCGGGTCGAGATCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGt                                                                                           >  1:3972513/1‑101 (MQ=255)
            aTTACGAGACCGACCAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTc                                                                                          <  2:642988/101‑1 (MQ=255)
            aTTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTc                                                                                          <  1:3503049/101‑1 (MQ=255)
             ttACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTcg                                                                                         >  2:1790649/1‑101 (MQ=255)
             ttACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGCcg                                                                                         >  1:469812/1‑101 (MQ=255)
                cGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTcgcgc                                                                                      <  1:1403991/101‑1 (MQ=255)
                cGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTccggc                                                                                      >  2:3748144/1‑97 (MQ=255)
                 gagaCCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTcgcgcg                                                                                     <  1:1727496/101‑1 (MQ=255)
                  agaCCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTcgcgcgc                                                                                    <  2:2672878/101‑1 (MQ=255)
                  agaCCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTAGCGGGCCGGGTcgcgcgc                                                                                    >  2:1737087/1‑101 (MQ=255)
                        aaCAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTc                                                                              <  2:1653630/101‑1 (MQ=255)
                        aaCAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTc                                                                              <  1:1323124/101‑1 (MQ=255)
                          cAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgc                                                                            >  2:579584/1‑100 (MQ=255)
                           aGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgac                                                                           >  2:3656252/1‑101 (MQ=255)
                           aGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgac                                                                           <  2:41378/101‑1 (MQ=255)
                           aGGTCAGGGTCGAGGTCAACGGGAAGATGGAGCCCGGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgac                                                                           <  1:1132930/101‑1 (MQ=255)
                            ggTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgacg                                                                          >  2:3976255/1‑101 (MQ=255)
                            ggTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgacg                                                                          <  1:2095691/101‑1 (MQ=255)
                             gTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTcgacga                                                                         <  1:1826038/101‑1 (MQ=255)
                              tCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGAt                                                                        <  1:2502824/101‑1 (MQ=255)
                              tCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGAt                                                                        <  1:379383/101‑1 (MQ=255)
                              gccGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGAt                                                                        <  2:2866627/100‑1 (MQ=255)
                                  ggTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATgtgg                                                                    >  1:1263966/1‑101 (MQ=255)
                                   gTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATgtggt                                                                   <  2:1554729/101‑1 (MQ=255)
                                      gAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGAt                                                                >  2:129409/1‑101 (MQ=255)
                                      gAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGAt                                                                >  1:200776/1‑101 (MQ=255)
                                       aGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATc                                                               >  1:2299400/1‑101 (MQ=255)
                                        ggTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCt                                                              >  2:1696123/1‑101 (MQ=255)
                                        ggTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCt                                                              <  2:3274072/101‑1 (MQ=255)
                                          tCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTAt                                                            >  2:1971459/1‑101 (MQ=255)
                                          tCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTAt                                                            >  2:4196299/1‑101 (MQ=255)
                                           cAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATg                                                           <  1:2564006/101‑1 (MQ=255)
                                            aaCGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGTGCGCGATTTCGACGATGTGGTGATCTATGc                                                          >  1:320857/1‑101 (MQ=255)
                                            aaCGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGc                                                          >  1:1220370/1‑101 (MQ=255)
                                            aaCGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGc                                                          <  2:3746178/101‑1 (MQ=255)
                                             aCGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGcc                                                         <  2:1202123/101‑1 (MQ=255)
                                              cGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCt                                                        >  1:2436079/1‑101 (MQ=255)
                                                ggAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTcg                                                      >  1:2176685/1‑101 (MQ=255)
                                                ggAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTcg                                                      <  2:2160720/101‑1 (MQ=255)
                                                  naGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGNNNngnn                                                    >  1:744112/2‑99 (MQ=255)
                                                  aaGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTcgcg                                                    <  2:1358686/101‑1 (MQ=255)
                                                   aGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCgcgc                                                   >  2:1982234/1‑101 (MQ=255)
                                                    gATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCt                                                  >  2:1886885/1‑101 (MQ=255)
                                                     aTGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTTGACGATGGGGTGATCTATGCCTCGCGCta                                                 >  2:3905407/1‑100 (MQ=255)
                                                     aTGGAGACCCGCAGCCAGCAGGTGCGTCACGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTc                                                 <  2:1598754/101‑1 (MQ=255)
                                                      tGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCg                                                <  1:2387715/101‑1 (MQ=255)
                                                        gagaCCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGtt                                              <  2:3027437/101‑1 (MQ=255)
                                                        gagaCCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGtt                                              <  1:1804078/101‑1 (MQ=255)
                                                          gaCCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTgc                                            >  1:2734054/1‑101 (MQ=255)
                                                            cccGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTgccg                                          >  2:2404252/1‑101 (MQ=255)
                                                               gCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGccgccc                                       <  1:3665087/101‑1 (MQ=255)
                                                                cagccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGccgcccg                                      >  2:3573615/1‑101 (MQ=255)
                                                                cagccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGccgcccg                                      >  1:658826/1‑101 (MQ=255)
                                                                 agccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGccgcccgc                                     <  2:2306711/101‑1 (MQ=255)
                                                                 agccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGccgcccgc                                     >  2:3336697/1‑101 (MQ=255)
                                                                  gccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCcgcccgcc                                    >  1:181703/1‑101 (MQ=255)
                                                                   ccagcAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCt                                   <  1:3779371/101‑1 (MQ=255)
                                                                    cagcagGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTa                                  <  1:4045956/101‑1 (MQ=255)
                                                                     agcagGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTAc                                 >  2:73755/1‑101 (MQ=255)
                                                                        agGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATg                              >  1:488027/1‑101 (MQ=255)
                                                                         ggTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATgg                             >  2:858766/1‑101 (MQ=255)
                                                                         ggTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATgg                             <  2:378041/101‑1 (MQ=255)
                                                                          gTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATggc                            <  1:3026969/101‑1 (MQ=255)
                                                                          gTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATggc                            <  2:1207934/101‑1 (MQ=255)
                                                                           tGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATggcg                           >  2:561162/1‑101 (MQ=255)
                                                                             cGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATggcggc                         <  1:591473/101‑1 (MQ=255)
                                                                                  tGTCCGCTGGCCCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGc                    <  1:3414246/101‑1 (MQ=255)
                                                                                  tGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGc                    <  1:814936/101‑1 (MQ=255)
                                                                                   gTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCa                   <  2:1815358/101‑1 (MQ=255)
                                                                                     ccGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGAAGc                 >  2:603664/1‑101 (MQ=255)
                                                                                       gCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCt               >  2:772727/1‑101 (MQ=255)
                                                                                        cTGGCCCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCtt              <  1:4293415/101‑1 (MQ=255)
                                                                                           gACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGGGCTGCAGCCTTggg           >  2:3368343/1‑101 (MQ=255)
                                                                                            aCCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGa          >  1:1180704/1‑101 (MQ=255)
                                                                                             ccccGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGAt         <  1:4322028/101‑1 (MQ=255)
                                                                                              cccGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATc        <  2:2805698/101‑1 (MQ=255)
                                                                                               ccGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCt       <  2:3684573/101‑1 (MQ=255)
                                                                                               ccGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCt       >  2:3599606/1‑101 (MQ=255)
                                                                                               ccGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCt       <  2:2722699/101‑1 (MQ=255)
                                                                                                cGGTCGCGGGCCGGGTCGCGGGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTg      <  2:3446770/101‑1 (MQ=255)
                                                                                                cGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTg      >  1:3648595/1‑101 (MQ=255)
                                                                                                 ggTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTGt     <  2:1704194/101‑1 (MQ=255)
                                                                                                  gTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTGTc    >  2:3845330/1‑101 (MQ=255)
                                                                                                   tCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTGTCg   <  1:3573863/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
GCGGCGACGCCTATTACGAGACCGAACAGGTCCGGGTCGAGGTCAACGGGAAGATGGAGACCCGCAGCCAGCAGGTGCGTCATGTCCGCTGGACCCCGGTCGCGGGCCGGGTCGCGCGCGATTTCGACGATGTGGTGATCTATGCCTCGCGCTCGTTGCCGCCCGCCTACATGGCGGCGCTGCAGCCTTGGGATCTGTCGG  >  NC_014034/2697676‑2697876

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG