BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395832 =	150 (1.010)	35 (0.230)	9/132	21.8	0.20	intergenic (+644/‑287)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1434845	132 (0.580)	35 (0.230)	9/132	21.8	0.20	intergenic (‑624/‑334)	RCAP_rcc01334/RCAP_rcc01335	hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 176 total aligned reads displayed.


GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCG  >  NC_014034/1434746‑1434945


gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                                                       >  2:3794623/1‑101 (MQ=11)


 tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATg                                                                                                      >  2:2307995/1‑101 (MQ=31)


    cTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGaa                                                                                                   <  1:1661428/101‑1 (MQ=33)


     tCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGaaa                                                                                                  >  2:3150903/1‑101 (MQ=34)


         cccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACcg                                                                                              <  1:2110166/101‑1 (MQ=39)


          ccGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACcgc                                                                                             <  1:224547/101‑1 (MQ=40)


            gcgGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCgg                                                                                           <  1:1970483/101‑1 (MQ=255)


            gcgGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCgg                                                                                           >  2:2800817/1‑101 (MQ=255)


               ggggCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.Ct.t                                                                                      >  1:2129994/1‑101 (MQ=255)


                   cGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCAcc                                                                                  >  1:1828682/1‑101 (MQ=255)


                    gTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACcg                                                                                 <  1:1919348/101‑1 (MQ=255)


                     tGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACcgc                                                                                >  2:1360677/1‑101 (MQ=255)


                     tGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACcgc                                                                                >  1:2455744/1‑101 (MQ=255)


                       tctCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACcgcgc                                                                              <  1:2359681/99‑1 (MQ=255)


                           gAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATGGAAAACAGCGG.CA.TAACAGCGCCGGa                                                                          >  2:672931/1‑101 (MQ=14)


                            aaaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAt                                                                         <  2:4306867/101‑1 (MQ=255)


                             aaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAtt                                                                        <  2:1211311/101‑1 (MQ=255)


                             aaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAtt                                                                        >  2:1196952/1‑101 (MQ=255)


                             aaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAtt                                                                        >  1:4144807/1‑101 (MQ=255)


                             aaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAtt                                                                        <  2:1111252/101‑1 (MQ=255)


                             aaCGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGAtt                                                                        <  1:2183088/101‑1 (MQ=255)


                                 acgCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGt                                                                    <  2:422299/101‑1 (MQ=255)


                                  cgcgCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTc                                                                   <  2:2563868/101‑1 (MQ=255)


                                  cgcgCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTc                                                                   <  1:70918/101‑1 (MQ=255)


                                   gcgcTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCg                                                                  <  1:1275876/101‑1 (MQ=255)


                                   gcgcTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCg                                                                  <  2:4078339/101‑1 (MQ=255)


                                   gcgcTGAAGGAGGGTGATCTCGGTGGCGCCTTGACGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCg                                                                  <  1:3794876/101‑1 (MQ=255)


                                       tGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTcc                                                              >  1:3325169/1‑101 (MQ=255)


                                        gAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTAGCTccc                                                             >  2:150708/1‑101 (MQ=255)


                                         aaGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTcccc                                                            >  2:589542/1‑101 (MQ=255)


                                           ggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTcccccc                                                          <  2:516765/101‑1 (MQ=255)


                                           ggaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTcccccc                                                          >  1:3928935/1‑101 (MQ=255)


                                            gaggGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCcg                                                         <  2:3707326/101‑1 (MQ=255)


                                              gggTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCcgcg                                                       >  2:3651346/1‑101 (MQ=255)


                                               ggTGATCTCGGTGGCGCCTTGTCGCTCCCACCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCgg                                                      <  2:733717/101‑1 (MQ=255)


                                                gTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCggg                                                     <  1:2977475/101‑1 (MQ=255)


                                                 tGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCgggg                                                    >  2:1159454/1‑101 (MQ=255)


                                                  gATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCggggg                                                   >  1:3744821/1‑101 (MQ=255)


                                                     ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGt                                                >  1:2751801/1‑101 (MQ=255)


                                                     ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGt                                                <  2:2388539/101‑1 (MQ=255)


                                                     ctcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGGCGCTCCCCCCGCGGGGGCgg                                                >  2:1611452/1‑100 (MQ=255)


                                                      tcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTg                                               <  1:2619239/101‑1 (MQ=255)


                                                      tcGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTg                                               <  1:3824601/101‑1 (MQ=255)


                                                       cGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTgg                                              <  1:4313459/101‑1 (MQ=255)


                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                            >  1:1537795/1‑101 (MQ=255)


                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                            >  2:2893245/1‑101 (MQ=255)


                                                         gTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGAt                                            >  2:1446944/1‑101 (MQ=255)


                                                          tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                           >  1:1569869/1‑101 (MQ=255)


                                                          tGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATc                                           >  1:2298228/1‑101 (MQ=255)


                                                           ggCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                          <  1:1852534/101‑1 (MQ=255)


                                                            gcgcCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                         >  1:1065695/1‑101 (MQ=255)


                                                                  tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGt                                   >  1:4266780/1‑101 (MQ=255)


                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGCAGATCTCGGTCTGGGTGCGCTCGCGGTTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcat                                    >  2:3153404/1‑99 (MQ=2)


                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                  >  2:2849577/1‑101 (MQ=255)


                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                  >  1:4007299/1‑101 (MQ=255)


                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTg                                  >  2:2732636/1‑101 (MQ=255)


                                                                   gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGAGCGGGATTGGGTGGCTCCCCCCGCGGGGGCGTGGAACGAAACCGTg                                  >  2:1831776/1‑101 (MQ=255)


                                                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                 <  1:4278980/101‑1 (MQ=255)


                                                                    tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGa                                 >  1:4146570/1‑101 (MQ=255)


                                                                     cGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGAt                                <  2:1821903/101‑1 (MQ=255)


                                                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                               <  2:3840555/101‑1 (MQ=255)


                                                                      gCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATg                               >  2:1540789/1‑101 (MQ=255)


                                                                       cTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGc                              <  2:1828558/101‑1 (MQ=255)


                                                                        tCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCg                             <  1:3651599/101‑1 (MQ=255)


                                                                            cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                         >  1:3075924/1‑101 (MQ=255)


                                                                            cccGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGcc                         >  1:1895544/1‑101 (MQ=255)


                                                                              cgcgGGGTCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                       <  2:3982047/101‑1 (MQ=255)


                                                                              cgcgGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCg                       >  1:1472499/1‑101 (MQ=255)


                                                                                cgGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGAt                     >  1:1207779/1‑101 (MQ=255)


                                                                                cgGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGAt                     <  1:3151127/101‑1 (MQ=255)


                                                                                 gggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                    <  1:3609333/101‑1 (MQ=255)


                                                                                 gggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATc                    >  1:2679628/1‑101 (MQ=255)


                                                                                  ggggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATcc                   >  1:951025/1‑101 (MQ=255)


                                                                                   gggCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCa                  <  1:3698140/101‑1 (MQ=255)


                                                                                   gggCGCGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGAGGATCGAAACCGTGATGCGTGCCCGATCCa                  >  1:304450/1‑101 (MQ=255)


                                                                                     gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                <  2:189087/101‑1 (MQ=255)


                                                                                     gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                >  2:2076306/1‑101 (MQ=255)


                                                                                     gCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATc                <  1:909352/101‑1 (MQ=255)


                                                                                      cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTTGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGGCCGATCCACCg               >  2:487081/1‑101 (MQ=255)


                                                                                      cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGCTGCGTGCCCGATCCCTCg               >  2:72479/1‑101 (MQ=255)


                                                                                      cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg               >  2:3502307/1‑101 (MQ=255)


                                                                                      cGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCg               <  1:589610/101‑1 (MQ=255)


                                                                                       gTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCgg              >  2:438661/1‑101 (MQ=255)


                                                                                        tGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg             >  2:3019225/1‑101 (MQ=255)


                                                                                        tGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCggg             >  1:669431/1‑101 (MQ=255)


                                                                                         ggATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGt            >  1:1648961/1‑101 (MQ=255)


                                                                                          gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt           >  2:970426/1‑101 (MQ=255)


                                                                                          gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt           <  1:3377532/101‑1 (MQ=255)


                                                                                          gATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGtt           >  1:1245553/1‑101 (MQ=255)


                                                                                           aTCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGttt          <  1:322518/101‑1 (MQ=255)


                                                                                             cGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg        >  1:2040839/1‑101 (MQ=255)


                                                                                             cGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcg        >  1:1456839/1‑101 (MQ=255)


                                                                                               aaaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCCTCGGGTTTcgcg      >  1:4320885/1‑101 (MQ=255)


                                                                                               aaaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTcgcg      <  1:2281464/101‑1 (MQ=255)


                                                                                                aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg     >  2:3302296/1‑101 (MQ=255)


                                                                                                aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg     <  1:3222077/101‑1 (MQ=255)


                                                                                                aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCgg     >  1:2927894/1‑101 (MQ=255)


                                                                                                aaCATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCCCgg     >  2:453780/1‑101 (MQ=255)


                                                                                                  cATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGcc   >  1:2677861/1‑101 (MQ=255)


                                                                                                   aTGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCg  >  2:2231881/1‑101 (MQ=255)


GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGACGCGCTGAAGGAGGGTGATCTCGGTGGCGCCTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGAAAACCGCGG.CT.TCACCGCGCGGGATTGGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGATGCGTGCCCGATCCATCGGGTTTCGCGGCCG  >  NC_014034/1434746‑1434945

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG