BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1640006 =	45 (0.220)	35 (0.170)	8/178	28.1	0.29	intergenic (+86/‑59)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
*	?	NC_014034	= 1748562	123 (0.540)	35 (0.170)	8/178	28.1	0.29	intergenic (‑266/‑132)	RCAP_rcc01616/gppA	hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase
Rejected: Position hash score below cutoff.

Only 100 of 142 total aligned reads displayed.


CCCGCCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTA  >  NC_014034/1748462‑1748660


cccgcccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.gggggg                                                                                                          <  1:1312298/101‑1 (MQ=255)


 ccgcccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGa                                                                                                         <  2:753515/101‑1 (MQ=255)


  cgcccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAg                                                                                                        >  1:1906142/1‑101 (MQ=255)


   gcccgGTCGCTTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAgg                                                                                                       <  2:1902098/101‑1 (MQ=255)


   gcccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAgg                                                                                                       <  2:2132326/101‑1 (MQ=255)


   gcccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAgg                                                                                                       <  2:2788394/101‑1 (MQ=255)


    cccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGc                                                                                                      <  1:353490/101‑1 (MQ=255)


    cccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGc                                                                                                      <  2:3250318/101‑1 (MQ=255)


     ccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGcc                                                                                                     >  1:2126295/1‑101 (MQ=255)


     ccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGcc                                                                                                     <  1:2967632/101‑1 (MQ=255)


       ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGc                                                                                                   >  2:2293634/1‑101 (MQ=255)


        gTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCa                                                                                                  <  2:3485287/101‑1 (MQ=255)


        gTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCa                                                                                                  <  1:1956744/101‑1 (MQ=255)


         tCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAg                                                                                                 <  2:560006/101‑1 (MQ=255)


          cGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAgg                                                                                                <  1:2924695/101‑1 (MQ=255)


            ccTTGCCGTGCGCGGCGGAGCCGCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc                                                                                              <  1:453171/101‑1 (MQ=255)


            ccTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc                                                                                              <  2:1269310/101‑1 (MQ=255)


            ccTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc                                                                                              >  1:2208695/1‑101 (MQ=255)


             cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc.c                                                                                            <  1:2412199/101‑1 (MQ=255)


             cTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc.c                                                                                            <  1:2366263/101‑1 (MQ=255)


              ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGCGGGAGGCCGCAGGCC.C..g                                                                                         >  2:4011152/1‑101 (MQ=255)


               tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                        >  1:1340030/1‑101 (MQ=255)


               tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                        >  2:778799/1‑101 (MQ=255)


               tGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg                                                                                        <  1:1731477/101‑1 (MQ=255)


                 cccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.g                                                                                    <  1:1463782/101‑1 (MQ=255)


                 cccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.g                                                                                    >  2:2438535/1‑101 (MQ=255)


                  ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGcc.cagatc                                                                                       >  2:3332063/1‑96 (MQ=255)


                  ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.gg                                                                                   >  2:1508685/1‑101 (MQ=255)


                   cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.ggg                                                                                  >  2:2593409/1‑100 (MQ=255)


                   cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.ggg                                                                                  >  2:3190968/1‑100 (MQ=255)


                   cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.ggg                                                                                  >  2:4269119/1‑100 (MQ=255)


                    tGCGCGGCGGAGCCTCGGGCGGAGGTATTTAGGGAAAGATGAAACGGTCCCCC.TTCATCTTGCCTAAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.gggc                                                                                 <  1:2293779/101‑3 (MQ=38)


                     ggggggcggGGCCTCCGGGGGAGGTATTTAGGGGAAGATGAAACGGGGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.gggca                                                                                <  1:1698319/97‑4 (MQ=25)


                      cgcgGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.gggcag                                                                               <  1:924350/101‑5 (MQ=255)


                       gcggcgGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..gg.g.gggcagc                                                                              <  1:2767067/101‑6 (MQ=255)


                        cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAgcg                                                                             >  2:1633178/1‑101 (MQ=255)


                        cggcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAgcg                                                                             <  2:802278/101‑1 (MQ=255)


                           cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGccc                                                                          >  1:2928837/1‑101 (MQ=255)


                            ggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGcccc                                                                         >  2:172229/1‑101 (MQ=255)


                            ggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGcccc                                                                         >  2:4060961/1‑101 (MQ=255)


                             gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGccccc                                                                        >  2:2694861/1‑101 (MQ=255)


                             gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGccccc                                                                        <  1:2970101/101‑1 (MQ=255)


                              aGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGcccccc                                                                       >  1:4120319/1‑101 (MQ=255)


                               gCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCg                                                                      >  2:491657/1‑101 (MQ=255)


                                 cTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGcc                                                                    >  2:4143130/1‑101 (MQ=255)


                                 cTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGcc                                                                    >  1:1269982/1‑101 (MQ=255)


                                   ccGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCtt                                                                  >  1:159316/1‑101 (MQ=255)


                                     ggcggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGc                                                                >  2:1771710/1‑101 (MQ=255)


                                      gcggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCCTGCt                                                               >  1:3082578/1‑101 (MQ=255)


                                       cggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCtt                                                              >  2:1090951/1‑101 (MQ=255)


                                        ggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCGTc                                                             >  2:3749557/1‑101 (MQ=255)


                                        ggAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CACAGCCCCCCGCCTTGCTTc                                                             >  1:3665696/1‑101 (MQ=37)


                                         gAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCg                                                            >  2:1353451/1‑101 (MQ=255)


                                           ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGc                                                          >  1:2154564/1‑101 (MQ=255)


                                           ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGc                                                          >  1:664118/1‑101 (MQ=255)


                                           ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGc                                                          >  2:3604639/1‑101 (MQ=255)


                                           ggTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGc                                                          >  1:4113767/1‑101 (MQ=255)


                                            gTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGcc                                                         >  2:1451541/1‑101 (MQ=255)


                                            gTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGcc                                                         >  1:3770466/1‑101 (MQ=255)


                                              aTTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCtt                                                       >  2:1725859/1‑101 (MQ=255)


                                              aTTGAGGGCAAGATGAAACGGTGTCCC.TTCCTCTTGCCTCAAATACCCC.GGGGGGAGGCCGCAAGCA.C..GGCT.GG.GAGCGTCCCCGGCCTTGCTTCTGGCtt                                                       >  2:1780857/1‑101 (MQ=255)


                                               ttgggggAAAGATGACCCGGTCCCCC.TTCCTCTCCCCAAAAATGGCCG.GGGGGGGGCCCGCGGCCG.G..GG.G.GGCCCGCCCCCCCCGCCTTGCTTCGGCCTTg                                                      <  2:369627/97‑1 (MQ=255)


                                                  tgggacaagagAAACGGTCCCCCTTTCTTCTT.CC.CAAAAATCCCGGGGGGGGGGGCCCCGGCC.GGGGG.G.GG.CCCCCCCCCCCGCCTTGCTTCGGCCTTGCg                                                    <  2:4158297/91‑1 (MQ=255)


                                                  aGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGa                                                   >  1:3258398/1‑101 (MQ=255)


                                                   gggCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGAc                                                  >  1:40244/1‑101 (MQ=255)


                                                    ggCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACg                                                 >  1:4344247/1‑101 (MQ=255)


                                                    ggCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACg                                                 >  2:3696913/1‑101 (MQ=255)


                                                       aaGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTcc                                              >  2:426587/1‑100 (MQ=255)


                                                       aaGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCa                                              >  2:3582240/1‑101 (MQ=255)


                                                        aGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCAc                                             >  2:3625956/1‑101 (MQ=255)


                                                          aTGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGTCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGGCTTGCGACGTCACGa                                           >  2:2849821/1‑101 (MQ=37)


                                                          aTGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGa                                           >  2:2939415/1‑101 (MQ=255)


                                                           tGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGaa                                          >  1:3647364/1‑101 (MQ=255)


                                                                  gTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCa                                   >  1:2777734/1‑101 (MQ=255)


                                                                   tGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt                                  >  2:732834/1‑101 (MQ=255)


                                                                      ccc.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCgg                               >  2:2433724/1‑101 (MQ=255)


                                                                      ccc.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCgg                               >  2:2085481/1‑101 (MQ=255)


                                                                       cc.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..GG.GAGG.CAGCGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCggg                              >  2:3850091/1‑101 (MQ=255)


                                                                        c.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCTGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc                             <  2:4345571/101‑1 (MQ=255)


                                                                        c.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc                             >  2:3132105/1‑101 (MQ=255)


                                                                        c.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgc                             >  1:771848/1‑101 (MQ=255)


                                                                           tCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcgc                           >  2:3730607/1‑101 (MQ=255)


                                                                            cATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCt                          >  1:790611/1‑101 (MQ=255)


                                                                            cATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCGGGCGCt                          >  1:312937/1‑101 (MQ=255)


                                                                               cTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                       >  1:2057146/1‑101 (MQ=255)


                                                                               cTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                       >  2:1055080/1‑101 (MQ=255)


                                                                                 tGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAc                     >  2:1701675/1‑101 (MQ=255)


                                                                                 tGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAc                     >  1:4093527/1‑101 (MQ=255)


                                                                                  gCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAAcc                    >  1:3446906/1‑101 (MQ=255)


                                                                                       aaaTATCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGGGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCgg               >  1:2467611/1‑101 (MQ=255)


                                                                                         atatCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcc             >  2:2349539/1‑101 (MQ=255)


                                                                                           atCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccc           >  1:2193284/1‑101 (MQ=255)


                                                                                           atCCC.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCCTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccc           >  2:1570255/1‑101 (MQ=255)


                                                                                             ccc.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc         >  2:197861/1‑101 (MQ=255)


                                                                                             ccc.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc         >  1:1666222/1‑101 (MQ=255)


                                                                                              cc.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc        >  2:1240649/1‑101 (MQ=255)


                                                                                               c.GGGGGGAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcg       >  1:2121996/1‑101 (MQ=255)


                                                                                                 ggggggAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgc      >  1:3421793/1‑101 (MQ=255)


                                                                                                  gggggAGGCCGCAGGCCGG..GG.G.GG.CCGCCCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgcg     <  2:2154425/101‑1 (MQ=255)


                                                                                                     ggAGGCCGCAGGCC.CG.GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTa  >  1:4399599/1‑101 (MQ=255)


CCCGCCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCC.TTCATCTTGCCTCAAATATCCC.GGGGGGAGGCCGCAGGCC.C..GG.G.GG.CAGCGCCCCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTA  >  NC_014034/1748462‑1748660

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG