New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2704461 =181 (0.880)2 (0.010) 2/182 34.5 0.01 coding (1410/2049 nt) RCAP_rcc02519 diguanylate cyclase/phosphodiesterase
?NC_014034 = 3422890 218 (0.960)coding (1564/1935 nt) capD polysaccharide biosynthesis protein CapD
Rejected: Position hash score below cutoff.

Only 100 of 237 total aligned reads displayed.

TGCAGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGAGG  >  NC_014034/3422790‑3422988
                                                                                                    |                                                                                                  
  cAGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAgccgcc                                                                                                  >  1:2615695/1‑101 (MQ=255)
  cAGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAgccgcc                                                                                                  <  2:3728922/101‑1 (MQ=255)
  cAGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAgccgcc                                                                                                  >  1:1677166/1‑101 (MQ=255)
  cAGCTTGTCCCCCGGACGCAGCCCGGTGGTGACGTTCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCTCGGTGAAGCCCGAAGTCTCGATCAgccgcc                                                                                                  <  2:1688861/101‑1 (MQ=255)
   aGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGccgccg                                                                                                 <  1:4182974/101‑1 (MQ=255)
    gCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCcgccgc                                                                                                <  2:1004631/101‑1 (MQ=255)
     cTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCcgcg                                                                                               <  1:1443824/101‑1 (MQ=255)
       tttCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGcc                                                                                             >  2:4143806/1‑101 (MQ=255)
        ttCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCa                                                                                            >  1:2123478/1‑101 (MQ=255)
         tCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAg                                                                                           <  1:2107332/101‑1 (MQ=255)
          cACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGa                                                                                          >  1:3444642/1‑101 (MQ=255)
           ccccGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGAt                                                                                         <  2:116607/100‑1 (MQ=255)
           ccccGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGAt                                                                                         <  2:138365/100‑1 (MQ=255)
           aCCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGAt                                                                                         >  1:868134/1‑101 (MQ=255)
             ccGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCg                                                                                       <  2:3099777/101‑1 (MQ=255)
             ccGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCg                                                                                       <  1:3244750/101‑1 (MQ=255)
               ggACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgat                                                                                     <  2:4339371/101‑1 (MQ=255)
                gACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgatg                                                                                    >  1:8265/1‑101 (MQ=255)
                gACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgatg                                                                                    <  1:2835670/101‑1 (MQ=255)
                gACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgatg                                                                                    >  2:1429439/1‑101 (MQ=255)
                 aCGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgatga                                                                                   <  1:3336672/101‑1 (MQ=255)
                  cGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCgatgat                                                                                  <  2:210864/101‑1 (MQ=255)
                    cAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCt                                                                                <  1:3362625/101‑1 (MQ=255)
                       cccGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCa                                                                             <  2:3441960/101‑1 (MQ=255)
                       cccGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCa                                                                             <  1:3473206/101‑1 (MQ=255)
                       cccGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCa                                                                             >  1:1242227/1‑101 (MQ=255)
                        ccGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCAc                                                                            >  2:411206/1‑101 (MQ=255)
                         cGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCAcc                                                                           <  2:3195531/101‑1 (MQ=255)
                         cGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCAcc                                                                           >  2:1184211/1‑101 (MQ=255)
                         cGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCAcc                                                                           <  2:1853977/101‑1 (MQ=255)
                          ggtggtGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCg                                                                          >  1:2402086/1‑101 (MQ=255)
                          ggtggtGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCg                                                                          <  1:125737/101‑1 (MQ=255)
                              gtgACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCt                                                                      <  2:3637046/101‑1 (MQ=255)
                               tgACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTg                                                                     <  2:3158511/101‑1 (MQ=255)
                               tgACGATCTCCATATCTGCCTCCGGGTTGAGCGCGCCGCGTAAGGTGAGGCCCCAAGTCTCGATCAGCCGCCGCGCCTGATCGATGATCTTCAcccgtcta                                                                     <  2:731995/101‑7 (MQ=255)
                                gACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCCCGGTGAAGCCAGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGc                                                                    <  2:3943946/101‑1 (MQ=255)
                                  cGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGccc                                                                  >  1:3210021/1‑101 (MQ=255)
                                  cGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGccc                                                                  >  2:1060851/1‑101 (MQ=255)
                                    aTCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCAt                                                                <  1:1256538/101‑1 (MQ=255)
                                    aTCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCAt                                                                >  2:452050/1‑101 (MQ=255)
                                    aTCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCAt                                                                <  1:2154448/101‑1 (MQ=255)
                                      ctcGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGt                                                              >  1:3764251/1‑101 (MQ=255)
                                        cGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTcc                                                            <  2:3891741/101‑1 (MQ=255)
                                        cGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTcc                                                            <  2:2564784/101‑1 (MQ=255)
                                         gATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCACGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCa                                                           <  2:4417182/101‑1 (MQ=255)
                                          atatCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAg                                                          >  1:556991/1‑101 (MQ=255)
                                           tatCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGc                                                         <  2:1088128/101‑1 (MQ=255)
                                            atCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCa                                                        <  1:1605542/101‑1 (MQ=255)
                                              cGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACg                                                      <  1:74504/101‑1 (MQ=255)
                                                  cTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGa                                                  >  2:2715929/1‑101 (MQ=255)
                                                   tCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTATCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGAc                                                 >  1:2998198/1‑101 (MQ=255)
                                                    cGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGaga                                                >  2:420685/1‑99 (MQ=255)
                                                    cGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGAcc                                                >  1:480062/1‑101 (MQ=255)
                                                    cGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGAcc                                                <  2:2020427/101‑1 (MQ=255)
                                                      gggTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTc                                              <  1:4027678/101‑1 (MQ=255)
                                                      gggTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTc                                              >  2:667560/1‑101 (MQ=255)
                                                       ggTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcg                                             <  1:3728540/101‑1 (MQ=255)
                                                        gTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgc                                            <  1:187252/101‑1 (MQ=255)
                                                        gTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgc                                            >  2:2345600/1‑101 (MQ=255)
                                                         ttGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgcc                                           <  2:1651735/101‑1 (MQ=255)
                                                          tGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgccg                                          >  1:4217280/1‑101 (MQ=255)
                                                           gcgcgcGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgccgc                                         <  1:3427159/101‑1 (MQ=255)
                                                           gcccgcgTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTcgccgc                                         <  1:2171145/98‑1 (MQ=255)
                                                            cgcgcgTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCgccgcc                                        >  1:2692198/1‑101 (MQ=255)
                                                             gcgcgTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGccc                                       <  2:872505/101‑1 (MQ=255)
                                                                cgTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCGATGTCCAGCACGAAGACCTGGCCGCCCTCg                                    >  2:701438/1‑101 (MQ=255)
                                                                 gTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCgg                                   <  2:1778796/101‑1 (MQ=255)
                                                                 gTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCgg                                   >  1:386301/1‑101 (MQ=255)
                                                                   cgcgCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCTCCGCCCTCGGCa                                 <  1:2418806/101‑1 (MQ=255)
                                                                   cgcgCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCa                                 >  1:3096098/1‑101 (MQ=255)
                                                                    gcgcACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCaa                                >  2:3010874/1‑101 (MQ=255)
                                                                    gcgcACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCaa                                <  2:2902828/101‑1 (MQ=255)
                                                                    gcgcACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCaa                                <  2:1204347/101‑1 (MQ=255)
                                                                      gcACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAg                              <  1:3130385/101‑1 (MQ=255)
                                                                        aCGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGa                            >  2:2270937/1‑101 (MQ=255)
                                                                        aCGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGa                            <  2:836234/101‑1 (MQ=255)
                                                                           gTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGcc                         >  1:1370419/1‑101 (MQ=255)
                                                                            tGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGccc                        <  1:4144067/101‑1 (MQ=255)
                                                                            tGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGccc                        >  2:4266880/1‑101 (MQ=255)
                                                                              aaGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGc                      >  2:2794765/1‑101 (MQ=255)
                                                                               aGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGcc                     <  2:3057269/101‑1 (MQ=255)
                                                                                   cGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCcagca                 <  2:2402106/101‑1 (MQ=255)
                                                                                    gAAGTCTCGATCAGCCGCCGCGCCAGATCGATGGTCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCcagcag                <  1:3834054/101‑1 (MQ=255)
                                                                                    gAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCcagcag                >  1:3947557/1‑101 (MQ=255)
                                                                                       gTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCAc             <  1:3613783/101‑1 (MQ=255)
                                                                                        tctcGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCAcc            >  1:3150971/1‑101 (MQ=255)
                                                                                          tcGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAg          >  2:4012303/1‑101 (MQ=255)
                                                                                          tcGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAg          <  1:411246/101‑1 (MQ=255)
                                                                                          tcGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAg          <  2:480010/101‑1 (MQ=255)
                                                                                           cGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGc         >  2:3354371/1‑101 (MQ=255)
                                                                                            gATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGcc        >  1:2915937/1‑101 (MQ=255)
                                                                                            gATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGcc        >  1:1114376/1‑101 (MQ=255)
                                                                                             aTCGGCCCCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGCCCCCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCcg       <  1:1083449/101‑1 (MQ=255)
                                                                                             aTCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCcg       <  1:2007861/101‑1 (MQ=255)
                                                                                               cAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGCCCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCcgcg     <  1:1429546/101‑1 (MQ=255)
                                                                                               cAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCcgcg     >  2:1482603/1‑101 (MQ=255)
                                                                                                aGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGCCCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGa    <  1:691637/101‑1 (MQ=255)
                                                                                                aGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGa    >  1:2601966/1‑101 (MQ=255)
                                                                                                aGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGa    >  2:352529/1‑101 (MQ=255)
                                                                                                 gccgccGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGAg   <  1:1189395/101‑1 (MQ=255)
                                                                                                    |                                                                                                  
TGCAGCTTTTCACCCGGACGCAGCCCGGTGGTGACGATCTCGATATCGCCCTCGGGGTTGCGCGCGTCGCGCACGGTGAAGCCCGAAGTCTCGATCAGCCGCCGCGCCAGATCGATGATCTTCACCGGCCTGCCCATGTCCAGCACGAAGACCTCGCCGCCCTCGGCAAAGGAGCCCGCCAGCAGCACCAGCCGCGAGG  >  NC_014034/3422790‑3422988

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 28 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG