Regulatory Modules
Displaying 131 - 140 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0223 | 0.012 | 8400 | 0.49 | DVU0135, DVU0660, DVU0724, DVU0796, DVU1060, DVU1220, DVU1693, DVU1827, DVU1942, DVU1978, DVU2436, DVU3389, DVU0136, DVU0141, DVU0323, DVU0414, DVU0726, DVU0795, DVU1029, DVU1091, DVU1540, DVU2055, DVU2210, DVU2471, DVU2493, DVU2552, DVU2892, DVU3208 | cellular nitrogen compound metabolic pro..., cellular aromatic compound metabolic pro..., cellular nitrogen compound biosynthetic ..., IMP biosynthetic process, 'de novo' IMP biosynthetic process |
bicluster_0329 | 17000 | 8700 | 0.43 | DVU0181, DVU0183, DVU0283, DVU0442, DVU1416, DVU1698, DVU1714, DVU2271, DVU2334, DVU2346, DVU2540, DVU2541, DVU2656, DVUA0048, DVUA0057 | chemotaxis, taxis, flavin adenine dinucleotide binding |
bicluster_0335 | 4800 | 9400 | 0.32 | DVUA0152, DVU2846, DVUA0010, DVUA0012, DVUA0015, DVUA0024, DVUA0037, DVUA0041, DVUA0043, DVUA0051, DVUA0064, DVUA0090 | oxidoreductase activity, acting on iron-... |
bicluster_0080 | 1000 | 9500 | 0.35 | DVU1053, DVU1107, DVU1162, DVU1504, DVU1513, DVU1515, DVU1516, DVU1969, DVU2604, DVU2645, DVU1417, DVU2647, DVU2720, DVU3139 | DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity, deaminase activity, S-adenosylmethionine-dependent methyltra... |
bicluster_0201 | 1900 | 10000 | 0.50 | DVU0655, DVU1437, DVU3213, DVUA0097, DVU0069, DVU0256, DVU0396, DVU0803, DVU0963, DVU1030, DVU1410, DVU1438, DVU2005, DVU2547, DVU2549, DVU2550, DVU2894, DVU3337 | cytoplasm, binding, organic cyclic compound binding, heterocyclic compound binding |
bicluster_0001 | 3100 | 11000 | 0.41 | DVU0383, DVU0824, DVU0964, DVU1243, DVU1790, DVU1962, DVU2120, DVU2139, DVU2169, DVU2326, DVU2602, DVU2622, DVU2915 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
bicluster_0218 | 1600 | 11000 | 0.35 | DVU0825, DVU0663, DVU0665, DVU0811, DVU0812, DVU0857, DVU0994, DVU1468, DVU1976, DVU1977, DVU2078, DVU2079, DVU2643 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., sulfur compound metabolic process, sulfur compound biosynthetic process |
bicluster_0024 | 1700 | 11000 | 0.38 | DVU1106, DVU1114, DVU1116, DVU1118, DVU1120, DVU1125, DVU1130, DVU1132, DVU1133, DVU1135, DVU1137, DVU1138, DVU1140, DVU1143 | DNA binding, nucleic acid binding |
bicluster_0194 | 5500 | 11000 | 0.46 | DVU0256, DVU0396, DVU0683, DVU0910, DVU0963, DVU1830, DVU2547, DVU0395, DVU0595, DVU0684, DVU0725, DVU0853, DVU1012, DVU1603, DVU2324, DVU2468, DVU2470, DVU2489, DVU2548, DVU2630, DVU2974, DVU3344 | |
bicluster_0041 | 1700 | 11000 | 0.35 | DVU0115, DVU0366, DVU1735, DVU2578, DVU2614, DVU2701, DVU2860, DVU3139, DVU0081, DVU2865 | NADP binding, ligase activity, forming carbon-nitrogen..., ligase activity |