Regulatory Modules
Displaying 61 - 70 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0043 |
4 |
24 |
0.39 | DVU1525, DVU1714, DVU1752, DVU2125, DVU2166, DVU2541, DVU2820, DVUA0143, DVU2163, DVU2164, DVU2542 | |
| bicluster_0072 |
5.5 |
2700 |
0.31 | DVU0375, DVU1115, DVU1733, DVU1740, DVU2740, DVU0860, DVU0889, DVU2158, DVU2611, DVU2695, DVUA0011 | oxidoreductase activity, acting on iron-... |
| bicluster_0032 |
5.7 |
59 |
0.43 | DVU0401, DVU0613, DVU0888, DVU0890, DVU0894, DVU0901, DVU0904, DVU0970, DVU1063, DVU2149, DVU2157, DVU2868, DVUA0151, DVU0426, DVU0892, DVU0906, DVU2539 | aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ... |
| bicluster_0281 |
7.1 |
28000 |
0.49 | DVU0234, DVU0235, DVU0025, DVU0233, DVU0370, DVU0577, DVU0578, DVU0579, DVU0580, DVU0596, DVU0597, DVU0600, DVU0601, DVU1418, DVU2414, DVU2588, DVU3036, DVU3269, DVU3381, DVU3382 | cell wall organization, cell wall organization or biogenesis, external encapsulating structure organiz..., oxidoreductase activity, acting on the a... |
| bicluster_0117 |
7.2 |
130 |
0.49 | DVU0110, DVU0156, DVU0326, DVU1376, DVU1461, DVU1462, DVU1463, DVU1464, DVU1544, DVU1883, DVU2140, DVU2932, DVU3009, DVU3216, DVU0007, DVU0413, DVU0612, DVU0760, DVU2329, DVU2338, DVU2491, DVU2765, DVU2766, DVU2767, DVU3067, DVU3172 | protein complex assembly, cytochrome complex assembly, cellular macromolecular complex assembly, cellular protein complex assembly, macromolecular complex subunit organizat... |
| bicluster_0344 |
9.8 |
1100 |
0.46 | DVU0014, DVU0764, DVU0784, DVU0841, DVU0968, DVU1008, DVU1025, DVU1026, DVU1092, DVU1260, DVU1290, DVU1323, DVU2032, DVU2033, DVU2035, DVU2682, DVU2696, DVU2697, DVU2901, DVU3210 | UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ..., 'de novo' UMP biosynthetic process, UMP metabolic process |
| bicluster_0124 |
10 |
6200 |
0.41 | DVU0658, DVU1766, DVU2601, DVU2758, DVU2777, DVU3257, DVU0430, DVU0894, DVU1052, DVU1208, DVU2139, DVU2640, DVU3169, DVUA0148 | small molecule biosynthetic process, aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., aromatic compound biosynthetic process, organonitrogen compound biosynthetic pro... |
| bicluster_0323 |
14 |
19 |
0.49 | DVU1025, DVU0064, DVU0732, DVU1089, DVU1090, DVU1205, DVU1206, DVU1220, DVU1293, DVU1615, DVU1616, DVU1617, DVU1618, DVU1619, DVU1620, DVU1819, DVU2586, DVU2890, DVU3065 | intramolecular transferase activity, fatty acid synthase activity, protein transmembrane transporter activi..., P-P-bond-hydrolysis-driven protein trans..., macromolecule transmembrane transporter ... |
| bicluster_0067 |
15 |
260 |
0.49 | DVU0028, DVU1127, DVU1161, DVU1779, DVU1998, DVU2187, DVU2253, DVU2812, DVU3044, DVU3160, DVU3214, DVU3260, DVU3329 | |
| bicluster_0121 |
17 |
2200 |
0.50 | DVU0408, DVU1171, DVU1367, DVU1387, DVU1739, DVU1750, DVU1995, DVU2017, DVU2068, DVU2178, DVU2263, DVU2682, DVU2842, DVU3138, DVU3218, DVUA0018, DVUA0067, DVUA0135, DVU0196, DVU0563, DVU0802, DVU0993, DVU1773, DVU2671, DVU3038, DVUA0071 | DNA integration, nucleic acid metabolic process, TAT protein transport complex, DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity |
