Regulatory Modules
Displaying 61 - 70 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0191 |
0.0000000000000046 |
0.31 |
0.45 | DVU3122, DVU0273, DVU0303, DVU0304, DVU0762, DVU0763, DVU2377, DVU2378, DVU2379, DVU2380, DVU2383, DVU2388, DVU2389, DVU2390, DVU2571, DVU2572, DVU2573, DVU2574, DVU2680, DVU2681, DVU3331, DVU3332, DVU3333 | ion binding, metal ion binding, cation binding, transition metal ion binding, binding |
| bicluster_0090 |
0.2 |
1400 |
0.45 | DVU0223, DVU0526, DVU0727, DVU0728, DVU0756, DVU1151, DVU1492, DVU1628, DVU1630, DVU1710, DVU1730, DVU1855, DVU2309, DVU2423, DVU2845, DVU2846, DVUA0089, DVU1379, DVU1629, DVU1729, DVU2614 | |
| bicluster_0004 |
3.1 |
2600 |
0.45 | DVU0483, DVU0595, DVU0662, DVU0663, DVU0664, DVU0725, DVU0812, DVU1013, DVU1212, DVU1629, DVU1839, DVU1874, DVU2324, DVU2439, DVU2467, DVU2468, DVU2469, DVU2974, DVU3283, DVU3316 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., cellular amino acid metabolic process, O-acyltransferase activity |
| bicluster_0008 |
0.00000000018 |
0.00000000027 |
0.45 | DVU0252, DVU0268, DVU0472, DVU0473, DVU0553, DVU0630, DVU0916, DVU0939, DVU1015, DVU1155, DVU1285, DVU1637, DVU1638, DVU1639, DVU1646, DVU2145, DVU2146, DVU2725, DVU2726, DVU3080 | O-acyltransferase activity, acetyltransferase activity |
| bicluster_0197 |
11000 |
13000 |
0.45 | DVU1724, DVU2706, DVU3142, DVUA0012, DVUA0034, DVUA0038, DVUA0042, DVUA0054, DVU0621, DVU2692, DVU2881, DVUA0031, DVUA0032, DVUA0035, DVUA0093, DVUA0102, DVUA0128, DVUA0136 | inorganic anion transmembrane transporte..., oxidoreductase activity, acting on iron-..., oxidoreductase activity, anion transmembrane transporter activity |
| bicluster_0148 |
0.029 |
2.7 |
0.45 | DVU0174, DVU0220, DVU0253, DVU0278, DVU1569, DVU1816, DVU2202, DVU2557, DVU2968, DVU3263, DVU0006, DVU0138, DVU0238, DVU0305, DVU0883, DVU1568, DVU1812, DVU1904, DVU2076, DVU2583, DVU2616, DVU2684, DVU2935, DVU3227, DVU3296 | cellular homeostasis, homeostatic process, regulation of biological quality, biological regulation, copper ion binding |
| bicluster_0151 |
180 |
3200 |
0.44 | DVU0873, DVU0874, DVU0956, DVU1287, DVU1288, DVU1289, DVU1293, DVU2519, DVU2922, DVU2925, DVU2927, DVU2928, DVU2929, DVU1574, DVU2231, DVU2518, DVU2923, DVU2924, DVU2926 | transcription, DNA-templated, RNA biosynthetic process, gene expression, RNA metabolic process, organelle |
| bicluster_0018 |
1.5 |
16000 |
0.44 | DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 | nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic... |
| bicluster_0019 |
1400 |
17000 |
0.44 | DVU0367, DVU0444, DVU0486, DVU0609, DVU0892, DVU1884, DVU1982, DVU2828, DVU3152, DVU3169, DVU3354, DVU0447, DVU0964, DVU1962 | glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process |
| bicluster_0347 |
0.5 |
19 |
0.44 | DVU0165, DVU0166, DVU0167, DVU0168, DVU0279, DVU0384, DVU0390, DVU0548, DVU0549, DVU0550, DVU0551, DVU0713, DVU0714, DVU1245, DVU1291, DVU2341, DVUA0069, DVUA0070 | integral component of membrane, intrinsic component of membrane, membrane part, membrane, ribonucleotide binding |
