Regulatory Modules
Displaying 91 - 100 of 162Methanococcus maripaludis S2
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
mmp-bicluster_0025 | 5.9 | 990 | 0.31 | MMP0026, MMP0133, MMP0243, MMP0284, MMP0315, MMP0316, MMP0412, MMP0588, MMP0610, MMP0878, MMP0921, MMP0953, MMP1011, MMP1014, MMP1195, MMP1356, MMP1425, MMP1048, MMP0137, MMP1361 | nucleic acid phosphodiester bond hydroly..., RNA phosphodiester bond hydrolysis, cellular nitrogen compound metabolic pro..., RNA metabolic process |
mmp-bicluster_0096 | 170 | 16000 | 0.31 | MMP0075, MMP0245, MMP1113, MMP1254, MMP1646, MMP0163, MMP0242, MMP0317, MMP0350, MMP0370, MMP0572, MMP0657, MMP0946, MMP1013, MMP1260, MMP1515, MMP0060, MMP0668, MMP1147, MMP1208, MMP1433, MMP0061, MMP0443, MMP0578, MMP1401, MMP0062, MMP1403 | ribonucleoprotein complex biogenesis, ribosome biogenesis, dicarboxylic acid metabolic process, cytoplasmic part, large ribosomal subunit rRNA binding |
mmp-bicluster_0048 | 0.0095 | 780 | 0.31 | MMP0533, MMP0192, MMP0275, MMP0466, MMP0467, MMP0468, MMP0469, MMP0470, MMP0471, MMP0472, MMP0502, MMP0680, MMP0851, MMP1193, MMP1194, MMP1481, MMP1482, MMP1483, MMP1602 | regulation of transcription, DNA-templat..., regulation of nucleobase-containing comp..., regulation of nitrogen compound metaboli..., regulation of RNA metabolic process, regulation of nucleic acid-templated tra... |
mmp-bicluster_0023 | 0.0000034 | 37 | 0.32 | MMP0035, MMP0069, MMP0321, MMP0322, MMP0476, MMP0477, MMP0496, MMP0528, MMP0563, MMP0742, MMP0799, MMP1019, MMP1224, MMP1329, MMP1553, MMP0113, MMP0115, MMP0997 | response to stress, glutamine family amino acid biosynthetic..., dicarboxylic acid metabolic process, glutamine family amino acid metabolic pr... |
mmp-bicluster_0007 | 0.16 | 2400 | 0.32 | MMP0080, MMP0282, MMP0308, MMP0318, MMP0326, MMP0345, MMP0346, MMP0359, MMP0408, MMP0539, MMP0666, MMP0696, MMP0708, MMP0893, MMP0947, MMP1018, MMP1266, MMP1315, MMP1352, MMP1470, MMP1587, MMP1588, MMP1589, MMP1615, MMP0541, MMP1105, MMP1146, MMP1316 | ribonucleotide biosynthetic process, ribose phosphate biosynthetic process, ribonucleotide metabolic process, ribose phosphate metabolic process, carbohydrate derivative biosynthetic pro... |
mmp-bicluster_0108 | 0.000000000012 | 0.083 | 0.32 | MMP0029, MMP0194, MMP0335, MMP0542, MMP0628, MMP0988, MMP1385, MMP1486, MMP1660, MMP0042, MMP0634, MMP0635, MMP0711, MMP0964, MMP1015, MMP1162, MMP1703, MMP1156 | antioxidant activity, oxidoreductase activity, acting on perox..., metal ion transmembrane transporter acti..., inorganic cation transmembrane transport..., coenzyme F420 hydrogenase activity |
mmp-bicluster_0075 | 0.97 | 7100 | 0.32 | MMP0008, MMP0009, MMP0113, MMP0119, MMP0235, MMP0236, MMP0237, MMP0240, MMP0392, MMP0452, MMP0458, MMP0595, MMP0635, MMP0636, MMP0723, MMP0725, MMP0909, MMP0934, MMP1141, MMP1162, MMP0239, MMP0241, MMP0453, MMP1220, MMP1295 | pyridoxal phosphate binding, cofactor binding, endopeptidase activity |
mmp-bicluster_0129 | 2100 | 24000 | 0.32 | MMP0264, MMP0554, MMP0906, MMP0941, MMP1121, MMP1440, MMP1467, MMP1630, MMP0036, MMP0072, MMP0265, MMP0296, MMP0580, MMP0876, MMP0883, MMP0970, MMP1011, MMP1109, MMP1265, MMP1334, MMP1600, MMP1112, MMP1356, MMP0131 | |
mmp-bicluster_0098 | 0.000024 | 3300 | 0.32 | MMP0924, MMP0925, MMP0926, MMP0930, MMP1230, MMP1231, MMP1675, MMP0050, MMP0051, MMP0342, MMP0413, MMP0487, MMP0922, MMP0923, MMP0928, MMP0929, MMP0931, MMP0932, MMP0933, MMP0945, MMP1674, MMP1676, MMP0927, MMP1719 | S-adenosylmethionine-dependent methyltra..., methyltransferase activity, transferase activity, transferring one-c..., oxidoreductase activity, acting on the C..., catalytic activity |
mmp-bicluster_0139 | 17 | 42 | 0.33 | MMP0357, MMP0358, MMP0989, MMP1500, MMP0056, MMP0152, MMP0353, MMP0356, MMP0541, MMP0579, MMP1117, MMP1189, MMP1499, MMP1554, MMP1610, MMP1648, MMP1711, MMP1077, MMP1327, MMP1328, MMP1356 | DNA binding, racemase and epimerase activity, acting ... |