Regulatory Modules
Displaying 111 - 120 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0203 | 1100 | 4100 | 0.44 | DVU2062, DVU2218, DVU2424, DVU2517, DVU1385, DVU1431, DVU1836, DVU2295, DVU2906, DVU3132, DVU3142 | response to stimulus, cellular response to stimulus, DNA repair, cellular response to DNA damage stimulus, catalytic complex |
bicluster_0184 | 2.2 | 4100 | 0.49 | DVU0044, DVU0047, DVU0521, DVU0522, DVU0046, DVU0310, DVU0311, DVU0312, DVU0313, DVU0314, DVU0315, DVU0409, DVU0512, DVU0513, DVU0515, DVU0516, DVU0517, DVU0519, DVU0520, DVU0858, DVU0862, DVU0863, DVU0913, DVU2211, DVU2232, DVU3001, DVU3003, DVU3018, DVU3019, DVU3020 | organelle organization, cell projection assembly, bacterial-type flagellum assembly, organelle assembly, cell projection organization |
bicluster_0059 | 4000 | 4400 | 0.31 | DVU0860, DVU0889, DVU2122, DVU2129, DVU2154, DVU2156, DVU2172, DVU3285, DVU2125, DVU2170 | peptidase activity |
bicluster_0248 | 230 | 4600 | 0.42 | DVU1199, DVU1314, DVU1623, DVU2226, DVU1197, DVU1198, DVU1203, DVU1204, DVU1304, DVU1305, DVU1306, DVU1307, DVU1315, DVU1321, DVU1322, DVU2929 | nucleobase-containing compound biosynthe..., nucleoside triphosphate biosynthetic pro..., ribonucleoside triphosphate biosynthetic..., nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr... |
bicluster_0058 | 2700 | 4800 | 0.38 | DVU0197, DVU0206, DVU0207, DVU0209, DVU0210, DVU0211, DVU0212, DVU0214, DVU0216, DVU0217, DVU0219, DVU2850, DVU2851, DVU2853, DVU2857, DVU2858, DVU2859, DVU2861, DVU2864, DVU2860 | |
bicluster_0135 | 1.9 | 5000 | 0.47 | DVU0299, DVU0300, DVU0570, DVU0677, DVU1440, DVU1532, DVU1548, DVU1606, DVU2251, DVU2747, DVU2933, DVU3016, DVU0079, DVU0328, DVU0691, DVU1004, DVU2373, DVU2609, DVU2779, DVU3127, DVU3392 | cell envelope organization, Gram-negative-bacterium-type cell outer ..., membrane biogenesis, single-organism membrane organization, membrane organization |
bicluster_0210 | 200 | 5000 | 0.34 | DVU2637, DVU2786, DVU0365, DVU0366, DVU1152, DVU1710, DVU1829, DVU2161, DVU2266, DVU2578, DVU2599 | ligase activity, forming carbon-nitrogen..., ligase activity |
bicluster_0209 | 5300 | 5100 | 0.32 | DVU0572, DVU0665, DVU0813, DVU1457, DVU1601, DVU1875, DVU1876, DVU1984, DVU2086, DVU2325, DVU2497, DVU2893, DVU0576 | protein metabolic process, cellular protein metabolic process, macromolecule metabolic process, macromolecule catabolic process, transition metal ion binding |
bicluster_0217 | 18 | 5300 | 0.34 | DVU0389, DVU2070, DVU2153, DVU0658, DVU0675, DVU1234, DVU2057, DVU2084, DVU2094, DVU2155, DVU2169, DVU3354 | virion, viral capsid, virion part, carbon-carbon lyase activity |
bicluster_0101 | 4500 | 5600 | 0.33 | DVU1106, DVU1115, DVU1123, DVU1124, DVU1125, DVU1130, DVU1132, DVU1133, DVU1137, DVU1138, DVU1140 | DNA binding, nucleic acid binding |