Cre02.g092400.t1.1 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g092400.t1.1 chromosome_2 Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain CDS 2524028 2527246 + 3 218

Phytozome

Locus Genomic View Functional Annotation
Cre02.g092400.t1.1 Cre02.g092400.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g1732.t1 Not available 30786123 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0058
motif_0058_1

motif_0058_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000092
Motif Bicluster: 
bicluster_0058
Width: 
15
Number of Sites: 
1
Consensus: 
AnATGCaaATGCAcA
motif_0058_2

motif_0058_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
36
Motif Bicluster: 
bicluster_0058
Width: 
8
Number of Sites: 
1
Consensus: 
CAAcCAAA
 0.17
bicluster_0189
motif_0189_1

motif_0189_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
31
Motif Bicluster: 
bicluster_0189
Width: 
21
Number of Sites: 
1
Consensus: 
TttacACnAaaAgaaaaagCA
motif_0189_2

motif_0189_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
87000
Motif Bicluster: 
bicluster_0189
Width: 
23
Number of Sites: 
1
Consensus: 
AGCCCCCAAcCCCCCcAAAaCgT
 0.11

GO Terms

GO:0006810 GO:0005622 -

transport

GO Category: 
biological_process
Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.

intracellular

GO Category: 
cellular_component
Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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