Cre13.g588100.t1.2 rotamase cyclophilin 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g588100.t1.2 chromosome_13 rotamase cyclophilin 2 CDS 3546650 3552479 + 5 829

Phytozome

Locus Genomic View Functional Annotation
Cre13.g588100.t1.2 Cre13.g588100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CYN5 g14426.t1, Cre13.g588100.t1.1 JGI30639 30783969 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0033
motif_0033_1

motif_0033_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000011
Motif Bicluster: 
bicluster_0033
Width: 
21
Number of Sites: 
1
Consensus: 
AGCagcAgCnGCAcCAGCagC
motif_0033_2

motif_0033_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29
Motif Bicluster: 
bicluster_0033
Width: 
23
Number of Sites: 
1
Consensus: 
CcTCCtCCtcCtCcgcCTCCAnC
 0.10
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0003755 GO:0006457 -

peptidyl-prolyl cis-trans isomerase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

protein folding

GO Category: 
biological_process
Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI30639

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