Cre09.g396250.t1.2 vitamin E pathway gene 5

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g396250.t1.2 chromosome_9 vitamin E pathway gene 5 CDS 1784769 1789900 + 5 131

Phytozome

Locus Genomic View Functional Annotation
Cre09.g396250.t1.2 Cre09.g396250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VTE5 g9364.t1, Cre09.g396250.t1.1 JGI173650 30780333 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0036
motif_0036_1

motif_0036_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000085
Motif Bicluster: 
bicluster_0036
Width: 
15
Number of Sites: 
1
Consensus: 
CTgCTgctgCTGcTG
motif_0036_2

motif_0036_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0036
Width: 
21
Number of Sites: 
1
Consensus: 
cgCGCCcCcGCctCCGCcgcC
 0.21
bicluster_0078
motif_0078_1

motif_0078_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000056
Motif Bicluster: 
bicluster_0078
Width: 
21
Number of Sites: 
1
Consensus: 
GTgtGcgTGtgcgTGgGTGtG
motif_0078_2

motif_0078_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000017
Motif Bicluster: 
bicluster_0078
Width: 
24
Number of Sites: 
1
Consensus: 
gCtcCtGCtgCaGCTcctgCagCt
 0.29

GO Terms

GO:0016772 GO:0016020 -

transferase activity, transferring phosphorus-containing groups

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI173650

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