Cre02.g109550.t1.2 aspartate kinase-homoserine dehydrogenase ii

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g109550.t1.2 chromosome_2 aspartate kinase-homoserine dehydrogenase ii CDS 5645622 5649728 - 4 106

Phytozome

Locus Genomic View Functional Annotation
Cre02.g109550.t1.2 Cre02.g109550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
AHD3, HSD1 g2247.t1, Cre02.g109550.t1.1 JGI196320 30785805 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0058
motif_0058_1

motif_0058_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000092
Motif Bicluster: 
bicluster_0058
Width: 
15
Number of Sites: 
1
Consensus: 
AnATGCaaATGCAcA
motif_0058_2

motif_0058_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
36
Motif Bicluster: 
bicluster_0058
Width: 
8
Number of Sites: 
1
Consensus: 
CAAcCAAA
 0.17
bicluster_0169
motif_0169_1

motif_0169_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0003
Motif Bicluster: 
bicluster_0169
Width: 
14
Number of Sites: 
1
Consensus: 
ACACAcGCACaCgC
motif_0169_2

motif_0169_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.1e-21
Motif Bicluster: 
bicluster_0169
Width: 
21
Number of Sites: 
1
Consensus: 
CaGCacCAgCagCagCggCAg
 0.25

GO Terms

GO:0006520 GO:0055114 GO:0016491 GO:0050661 -

cellular amino acid metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

NADP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196320

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