Cre01.g002500.t1.2 Chlamyopsin, light-gated proton channel rhodopsin

Summary

	Chromosome	Product	Feature Type	Transcript Start	End	Strand	Length
Cre01.g002500.t1.2	chromosome_1	Chlamyopsin, light-gated proton channel rhodopsin	CDS	441094	444942	-	3 848

Phytozome

Locus Genomic View	Functional Annotation
Cre01.g002500.t1.2	Cre01.g002500.t1.2

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Product Synonyms

Symbol	Augustus Synonyms	STRING	PAC	Record in ChlamyCyc
COP1, COP2	g60.t1, Cre01.g002500.t1.1	JGI164843	30788346	Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

	Motif 1	Motif 2	Residual
bicluster_0114	motif_0114_1 motif_0114_1 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.000000000045 Motif Bicluster:  bicluster_0114 Width:  15 Number of Sites:  1 Consensus:  gCCAcCAcCAgCAcC	motif_0114_2 motif_0114_2 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.0000000004 Motif Bicluster:  bicluster_0114 Width:  23 Number of Sites:  1 Consensus:  GCgGccGCCGctGcggCTGcTGc	0.26
bicluster_0139	motif_0139_1 motif_0139_1 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  9.2e-24 Motif Bicluster:  bicluster_0139 Width:  24 Number of Sites:  1 Consensus:  ACACAcaCaCACaCACacACACAC	motif_0139_2 motif_0139_2 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.00000038 Motif Bicluster:  bicluster_0139 Width:  21 Number of Sites:  1 Consensus:  ACaCaCACACAcAtACACACA	0.18

GO Terms

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Regulated by

Displaying 1 - 2 of 2

Regulator Locus	Interaction	Weight	Other Influences

Regulates

String Network

Link to STRING	STRING Network
JGI164843

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