Cre01.g015350.t1.1 protochlorophyllide oxidoreductase A

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g015350.t1.1 chromosome_1 protochlorophyllide oxidoreductase A CDS 2635337 2638506 + 3 169

Phytozome

Locus Genomic View Functional Annotation
Cre01.g015350.t1.1 Cre01.g015350.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
POR, POR1 g370.t1 JGI136589 30789577 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0028
motif_0028_1

motif_0028_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000028
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
ATAccagcCCAAaCtAAAcCgAAc
motif_0028_2

motif_0028_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000067
Motif Bicluster: 
bicluster_0028
Width: 
24
Number of Sites: 
1
Consensus: 
cCAncagCACCagCAgcAgCagCA
 0.12
bicluster_0078
motif_0078_1

motif_0078_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000056
Motif Bicluster: 
bicluster_0078
Width: 
21
Number of Sites: 
1
Consensus: 
GTgtGcgTGtgcgTGgGTGtG
motif_0078_2

motif_0078_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000017
Motif Bicluster: 
bicluster_0078
Width: 
24
Number of Sites: 
1
Consensus: 
gCtcCtGCtgCaGCTcctgCagCt
 0.29

GO Terms

GO:0016491 GO:0008152 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI136589

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