Cre01.g019200.t1.1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre01.g019200.t1.1 chromosome_1 CDS 3090076 3095157 + 5 081

Phytozome

Locus Genomic View Functional Annotation
Cre01.g019200.t1.1 Cre01.g019200.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g450.t1 Not available 30788766 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0056
motif_0056_1

motif_0056_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0099
Motif Bicluster: 
bicluster_0056
Width: 
20
Number of Sites: 
1
Consensus: 
GGtggTGGtGGnGgtGGcGG
motif_0056_2

motif_0056_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
130000
Motif Bicluster: 
bicluster_0056
Width: 
11
Number of Sites: 
1
Consensus: 
TATCaTAcAaA
 0.23
bicluster_0123
motif_0123_1

motif_0123_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0123
Width: 
21
Number of Sites: 
1
Consensus: 
GCagnnGCTGcTGcnGaTGgt
motif_0123_2

motif_0123_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3400
Motif Bicluster: 
bicluster_0123
Width: 
21
Number of Sites: 
1
Consensus: 
CTCcGCCGCCGcCgcCgCcgC
 0.24

GO Terms

GO:0006364 GO:0030688 -

rRNA processing

GO Category: 
biological_process
Details: 
Any process involved in the conversion of a primary ribosomal RNA (rRNA) transcript into one or more mature rRNA molecules.

preribosome, small subunit precursor

GO Category: 
cellular_component
Details: 
A preribosomal complex consisting of 20S pre-rRNA, ribosomal proteins including late-associating small subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic small ribosomal subunit.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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