Cre02.g085450.t1.2 Coproporphyrinogen III oxidase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g085450.t1.2 chromosome_2 Coproporphyrinogen III oxidase CDS 1646979 1650920 + 3 941

Phytozome

Locus Genomic View Functional Annotation
Cre02.g085450.t1.2 Cre02.g085450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CPX1 g1581.t1, Cre02.g085450.t1.1 JGI53583 30785718 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0058
motif_0058_1

motif_0058_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000092
Motif Bicluster: 
bicluster_0058
Width: 
15
Number of Sites: 
1
Consensus: 
AnATGCaaATGCAcA
motif_0058_2

motif_0058_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
36
Motif Bicluster: 
bicluster_0058
Width: 
8
Number of Sites: 
1
Consensus: 
CAAcCAAA
 0.17
bicluster_0125
motif_0125_1

motif_0125_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.012
Motif Bicluster: 
bicluster_0125
Width: 
15
Number of Sites: 
1
Consensus: 
TaAAGgAGgnCAAGg
motif_0125_2

motif_0125_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
380
Motif Bicluster: 
bicluster_0125
Width: 
23
Number of Sites: 
1
Consensus: 
GCCAaTatatgAtActcAanATC
 0.16

GO Terms

GO:0004109 GO:0006779 GO:0055114 -

coproporphyrinogen oxidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX.

porphyrin-containing compound biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI53583

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