Cre02.g118300.t1.2 DEAD box RNA helicase (PRH75)

Chromosome Product Feature Type Transcript Start End Strand Length
Cre02.g118300.t1.2 chromosome_2 DEAD box RNA helicase (PRH75) CDS 6731867 6736494 + 4 627
Locus Genomic View Functional Annotation
Cre02.g118300.t1.2 Cre02.g118300.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HEL12, RHE g2455.t1, Cre02.g118300.t1.1 JGI196585 30784864 Search
Motif 1 Motif 2 Residual
bicluster_0068

motif_0068_1

e.value: 
1.4
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
CGCTgCTGCcGCtGCtGCTGc

motif_0068_2

e.value: 
3500
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
TtttagtanAgtTcnCnAtAATtA
0.13
bicluster_0194

motif_0194_1

e.value: 
4.2
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
CTGCtGgTGgTGCTGtTGCTGCTG

motif_0194_2

e.value: 
170
Motif Bicluster: 
Width: 
11
Number of Sites: 
1
Consensus: 
gaGCAACAAAA
0.14
GO:0003676 GO:0005524 GO:0008026 GO:0004386 GO:0003723 GO:0005634 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATP-dependent helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.

helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

nucleus

GO Category: 
cellular_component
Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI196585
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