Cre03.g143887.t1.1 Arginyl-tRNA synthetase, class Ic

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g143887.t1.1 chromosome_3 Arginyl-tRNA synthetase, class Ic CDS 89600 94266 - 4 666

Phytozome

Locus Genomic View Functional Annotation
Cre03.g143887.t1.1 Cre03.g143887.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g2858.t1, Cre01.g056050.t1.1, Cre01.g056050.t1.2 Not available 30787653 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0036
motif_0036_1

motif_0036_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000085
Motif Bicluster: 
bicluster_0036
Width: 
15
Number of Sites: 
1
Consensus: 
CTgCTgctgCTGcTG
motif_0036_2

motif_0036_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0036
Width: 
21
Number of Sites: 
1
Consensus: 
cgCGCCcCcGCctCCGCcgcC
 0.21
bicluster_0135
motif_0135_1

motif_0135_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
140
Motif Bicluster: 
bicluster_0135
Width: 
21
Number of Sites: 
1
Consensus: 
AaACaagAAAtGggCAAgaCa
motif_0135_2

motif_0135_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
390
Motif Bicluster: 
bicluster_0135
Width: 
11
Number of Sites: 
1
Consensus: 
AAtaTGCAGaC
 0.09

GO Terms

GO:0000166 GO:0004814 GO:0005524 GO:0006420 GO:0005737 -

nucleotide binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

arginine-tRNA ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

arginyl-tRNA aminoacylation

GO Category: 
biological_process
Details: 
The process of coupling arginine to arginyl-tRNA, catalyzed by arginyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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