Cre03.g205900.t1.2 S-adenosylmethionine decarboxylase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g205900.t1.2 chromosome_3 S-adenosylmethionine decarboxylase CDS 7429936 7433549 - 3 613

Phytozome

Locus Genomic View Functional Annotation
Cre03.g205900.t1.2 Cre03.g205900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
DCA1 g4193.t1, Cre03.g205900.t1.1 JGI183928 30787393 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0125
motif_0125_1

motif_0125_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.012
Motif Bicluster: 
bicluster_0125
Width: 
15
Number of Sites: 
1
Consensus: 
TaAAGgAGgnCAAGg
motif_0125_2

motif_0125_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
380
Motif Bicluster: 
bicluster_0125
Width: 
23
Number of Sites: 
1
Consensus: 
GCCAaTatatgAtActcAanATC
 0.16
bicluster_0201
motif_0201_1

motif_0201_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
0.25
Motif Bicluster: 
bicluster_0201
Width: 
15
Number of Sites: 
1
Consensus: 
TGntGgtGgTGGTgG
motif_0201_2

motif_0201_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
1
Motif Bicluster: 
bicluster_0201
Width: 
21
Number of Sites: 
1
Consensus: 
aTntATgAgaTttnaAtntAt
 0.18

GO Terms

GO:0004014 GO:0006597 GO:0008295 -

adenosylmethionine decarboxylase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: S-adenosyl-L-methionine + H(+) = S-adenosylmethioninamine + CO(2).

spermine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.

spermidine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI183928

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