Cre04.g219787.t1.2 UbiA prenyltransferase family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre04.g219787.t1.2 chromosome_4 UbiA prenyltransferase family protein CDS 2171286 2174421 + 3 135

Phytozome

Locus Genomic View Functional Annotation
Cre04.g219787.t1.2 Cre04.g219787.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g4791.t1, Cre04.g219787.t1.1 JGI422826 30791278 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0029
motif_0029_1

motif_0029_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0075
Motif Bicluster: 
bicluster_0029
Width: 
21
Number of Sites: 
1
Consensus: 
tTTTgTaAaTtTgtaTGTtTT
motif_0029_2

motif_0029_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
120
Motif Bicluster: 
bicluster_0029
Width: 
24
Number of Sites: 
1
Consensus: 
agttgCgGAaCTAacGcgtACGTa
 0.24
bicluster_0078
motif_0078_1

motif_0078_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000056
Motif Bicluster: 
bicluster_0078
Width: 
21
Number of Sites: 
1
Consensus: 
GTgtGcgTGtgcgTGgGTGtG
motif_0078_2

motif_0078_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000017
Motif Bicluster: 
bicluster_0078
Width: 
24
Number of Sites: 
1
Consensus: 
gCtcCtGCtgCaGCTcctgCagCt
 0.29

GO Terms

GO:0004659 GO:0016021 -

prenyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a prenyl group from one compound (donor) to another (acceptor).

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI422826

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