Cre05.g238250.t1.2 Basic-leucine zipper (bZIP) transcription factor family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre05.g238250.t1.2 chromosome_5 Basic-leucine zipper (bZIP) transcription factor family protein CDS 2933060 2936249 + 3 189

Phytozome

Locus Genomic View Functional Annotation
Cre05.g238250.t1.2 Cre05.g238250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
BLZ2 g5484.t1, Cre05.g238250.t1.1 Not available 30783203 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0019
motif_0019_1

motif_0019_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.029
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
tttgcAAAtgCTtatAtgnnt
motif_0019_2

motif_0019_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0019
Width: 
21
Number of Sites: 
1
Consensus: 
TGcTggtGCTGnTgCtGCTGc
 0.27
bicluster_0040
motif_0040_1

motif_0040_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000073
Motif Bicluster: 
bicluster_0040
Width: 
24
Number of Sites: 
1
Consensus: 
aCaGcaaCAgcaGCAgcgGCAGca
motif_0040_2

motif_0040_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.77
Motif Bicluster: 
bicluster_0040
Width: 
23
Number of Sites: 
1
Consensus: 
GTTTgCTGaTGCgCATTcCtCAt
 0.25

GO Terms

GO:0003700 GO:0043565 GO:0006355 -

sequence-specific DNA binding transcription factor activity

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.

sequence-specific DNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

regulation of transcription, DNA-dependent

GO Category: 
biological_process
Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-dependent transcription.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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