Cre06.g251900.t1.2 63 kDa inner membrane family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g251900.t1.2 chromosome_6 63 kDa inner membrane family protein CDS 384756 388598 + 3 842

Phytozome

Locus Genomic View Functional Annotation
Cre06.g251900.t1.2 Cre06.g251900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ALB3 g5641.t1, Cre06.g251900.t1.1 JGI187295 30780063 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0095
motif_0095_1

motif_0095_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000034
Motif Bicluster: 
bicluster_0095
Width: 
24
Number of Sites: 
1
Consensus: 
cGCCaCcgCCacCACcgCCaCtgc
motif_0095_2

motif_0095_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000012
Motif Bicluster: 
bicluster_0095
Width: 
23
Number of Sites: 
1
Consensus: 
acaAcAaggcAAAcAATtTgcaa
 0.15
bicluster_0189
motif_0189_1

motif_0189_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
31
Motif Bicluster: 
bicluster_0189
Width: 
21
Number of Sites: 
1
Consensus: 
TttacACnAaaAgaaaaagCA
motif_0189_2

motif_0189_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
87000
Motif Bicluster: 
bicluster_0189
Width: 
23
Number of Sites: 
1
Consensus: 
AGCCCCCAAcCCCCCcAAAaCgT
 0.11

GO Terms

GO:0051205 GO:0016021 -

protein insertion into membrane

GO Category: 
biological_process
Details: 
The process that results in the incorporation of a protein into a biological membrane.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI187295

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