Cre06.g261150.t1.2 Radical SAM superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre06.g261150.t1.2 chromosome_6 Radical SAM superfamily protein CDS 1677104 1684079 - 6 975

Phytozome

Locus Genomic View Functional Annotation
Cre06.g261150.t1.2 Cre06.g261150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
BIOB g5871.t1, Cre06.g261150.t1.1 JGI402991 30778853 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0036
motif_0036_1

motif_0036_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000085
Motif Bicluster: 
bicluster_0036
Width: 
15
Number of Sites: 
1
Consensus: 
CTgCTgctgCTGcTG
motif_0036_2

motif_0036_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000057
Motif Bicluster: 
bicluster_0036
Width: 
21
Number of Sites: 
1
Consensus: 
cgCGCCcCcGCctCCGCcgcC
 0.21

GO Terms

GO:0003824 GO:0051536 -

catalytic activity

GO Category: 
molecular_function
Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.

iron-sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI402991

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