Cre07.g352300.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre07.g352300.t1.2 chromosome_7 CDS 5656653 5659984 + 3 331

Phytozome

Locus Genomic View Functional Annotation
Cre07.g352300.t1.2 Cre07.g352300.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g8194.t1, Cre07.g352300.t1.1 JGI344895 30774901 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0044
motif_0044_1

motif_0044_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.5e-16
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
TgctcCtGCTgcTGCTgCTGC
motif_0044_2

motif_0044_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
cGTtAnttGtacaattatAaA
 0.14
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0003723 GO:0008173 GO:0006396 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

RNA methyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an RNA molecule.

RNA processing

GO Category: 
biological_process
Details: 
Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI344895

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