Cre09.g409350.t1.2 RNAse l inhibitor protein 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre09.g409350.t1.2 chromosome_9 RNAse l inhibitor protein 2 CDS 6771241 6782454 - 11 213

Phytozome

Locus Genomic View Functional Annotation
Cre09.g409350.t1.2 Cre09.g409350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
RLI1 g10145.t1, Cre09.g409350.t1.1 JGI119356 30781351 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0139
motif_0139_1

motif_0139_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
9.2e-24
Motif Bicluster: 
bicluster_0139
Width: 
24
Number of Sites: 
1
Consensus: 
ACACAcaCaCACaCACacACACAC
motif_0139_2

motif_0139_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000038
Motif Bicluster: 
bicluster_0139
Width: 
21
Number of Sites: 
1
Consensus: 
ACaCaCACACAcAtACACACA
 0.18
bicluster_0168
motif_0168_1

motif_0168_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.9
Motif Bicluster: 
bicluster_0168
Width: 
11
Number of Sites: 
1
Consensus: 
AATTcAtTTgT
motif_0168_2

motif_0168_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
67
Motif Bicluster: 
bicluster_0168
Width: 
24
Number of Sites: 
1
Consensus: 
cATCActctgtTaaGCAtTTTGcA
 0.19

GO Terms

GO:0005524 GO:0016887 GO:0051536 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

ATPase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

iron-sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI119356

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