Cre10.g436050.t1.2 Fe superoxide dismutase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre10.g436050.t1.2 chromosome_10 Fe superoxide dismutase 1 CDS 2474544 2475753 + 1 209

Phytozome

Locus Genomic View Functional Annotation
Cre10.g436050.t1.2 Cre10.g436050.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g10751.t1, Cre10.g436050.t1.1 JGI182933 30790769 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0053
motif_0053_1

motif_0053_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0053
Width: 
24
Number of Sites: 
1
Consensus: 
GcAgCGGcaGtaGCggCgGCngcg
motif_0053_2

motif_0053_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0053
Width: 
15
Number of Sites: 
1
Consensus: 
TttGTaTtgTTgagT
 0.13
bicluster_0172
motif_0172_1

motif_0172_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.3
Motif Bicluster: 
bicluster_0172
Width: 
15
Number of Sites: 
1
Consensus: 
AgGAAAGaagnAAaa
motif_0172_2

motif_0172_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
94000
Motif Bicluster: 
bicluster_0172
Width: 
21
Number of Sites: 
1
Consensus: 
tctGTAaTAcAtCTagGanaA
 0.14

GO Terms

GO:0004784 GO:0046872 GO:0006801 GO:0055114 -

superoxide dismutase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 2 superoxide + 2 H+ = O2 + hydrogen peroxide.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

superoxide metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI182933

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