Cre12.g483550.t1.2 beta vacuolar processing enzyme

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g483550.t1.2 chromosome_12 beta vacuolar processing enzyme CDS 38026 43478 + 5 452

Phytozome

Locus Genomic View Functional Annotation
Cre12.g483550.t1.2 Cre12.g483550.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VPE1 g12003.t1, Cre12.g483550.t1.1 JGI196085 30792718 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0044
motif_0044_1

motif_0044_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.5e-16
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
TgctcCtGCTgcTGCTgCTGC
motif_0044_2

motif_0044_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
cGTtAnttGtacaattatAaA
 0.14
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0004197 GO:0006508 -

cysteine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196085

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