Cre12.g510800.t1.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g510800.t1.2 chromosome_12 P-loop containing nucleoside triphosphate hydrolases superfamily protein CDS 1918571 1922520 - 3 949

Phytozome

Locus Genomic View Functional Annotation
Cre12.g510800.t1.2 Cre12.g510800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CHLI2 g12332.t1, Cre12.g510800.t1.1 JGI135584 30791685 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0069
motif_0069_1

motif_0069_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.14
Motif Bicluster: 
bicluster_0069
Width: 
21
Number of Sites: 
1
Consensus: 
GCTGctgCtGcCGcTgCCGnt
motif_0069_2

motif_0069_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.5
Motif Bicluster: 
bicluster_0069
Width: 
15
Number of Sites: 
1
Consensus: 
aATGaAAcagTGcaA
 0.14
bicluster_0134
motif_0134_1

motif_0134_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
450000
Motif Bicluster: 
bicluster_0134
Width: 
23
Number of Sites: 
1
Consensus: 
AACTAATGCGTACGcAGACCAGA
motif_0134_2

motif_0134_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
660
Motif Bicluster: 
bicluster_0134
Width: 
24
Number of Sites: 
1
Consensus: 
TaAaTTtccaTattTacaTgCcaa
 0.11

GO Terms

GO:0016851 GO:0015979 GO:0015995 -

magnesium chelatase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate.

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

chlorophyll biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI135584

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