Cre12.g519100.t1.2 acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g519100.t1.2 chromosome_12 acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit CDS 4236972 4241816 - 4 844

Phytozome

Locus Genomic View Functional Annotation
Cre12.g519100.t1.2 Cre12.g519100.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
ACX2 g12797.t1, Cre12.g519100.t1.1 JGI184945 30792077 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0058
motif_0058_1

motif_0058_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000092
Motif Bicluster: 
bicluster_0058
Width: 
15
Number of Sites: 
1
Consensus: 
AnATGCaaATGCAcA
motif_0058_2

motif_0058_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
36
Motif Bicluster: 
bicluster_0058
Width: 
8
Number of Sites: 
1
Consensus: 
CAAcCAAA
 0.17
bicluster_0174
motif_0174_1

motif_0174_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0174
Width: 
19
Number of Sites: 
1
Consensus: 
TGtTGGTGTggGTGAtGaa
motif_0174_2

motif_0174_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
52
Motif Bicluster: 
bicluster_0174
Width: 
24
Number of Sites: 
1
Consensus: 
TtTtgcaTgtgTacATaAAGaAaA
 0.17

GO Terms

GO:0003989 GO:0006633 GO:0009317 -

acetyl-CoA carboxylase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.

fatty acid biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.

acetyl-CoA carboxylase complex

GO Category: 
cellular_component
Details: 
A protein complex that catalyzes the first step in long-chain fatty acid biosynthesis. For example, in E. coli the complex is heterohexameric and composed of biotin carbonyl carrier protein, biotin carboxylase and the acetate CoA-transferase complex.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI184945

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