Cre12.g519180.t2.1 elongation factor Ts family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g519180.t2.1 chromosome_12 elongation factor Ts family protein CDS 4251046 4257910 - 6 864

Phytozome

Locus Genomic View Functional Annotation
Cre12.g519180.t2.1 Cre12.g519180.t2.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g12799.t1 Not available 30791738 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0024
motif_0024_1

motif_0024_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.4e-16
Motif Bicluster: 
bicluster_0024
Width: 
24
Number of Sites: 
1
Consensus: 
GTAaATACCAGCCCAAACTAAACC
motif_0024_2

motif_0024_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.2e-20
Motif Bicluster: 
bicluster_0024
Width: 
23
Number of Sites: 
1
Consensus: 
cCacCaCCacCacCAcCnCCACC
 0.17
bicluster_0181
motif_0181_1

motif_0181_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
96000
Motif Bicluster: 
bicluster_0181
Width: 
14
Number of Sites: 
1
Consensus: 
TatncAAtAGtTTG
motif_0181_2

motif_0181_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7500
Motif Bicluster: 
bicluster_0181
Width: 
15
Number of Sites: 
1
Consensus: 
CAGcAGCAgcGAGcn
 0.13

GO Terms

GO:0003723 GO:0005515 GO:0003746 GO:0006414 GO:0005622 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

translation elongation factor activity

GO Category: 
molecular_function
Details: 
Functions in chain elongation during polypeptide synthesis at the ribosome.

translational elongation

GO Category: 
biological_process
Details: 
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.

intracellular

GO Category: 
cellular_component
Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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