Cre12.g546150.t1.2 Cytochrome b6f complex PetM subunit

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g546150.t1.2 chromosome_12 Cytochrome b6f complex PetM subunit CDS 8701908 8702841 + 933

Phytozome

Locus Genomic View Functional Annotation
Cre12.g546150.t1.2 Cre12.g546150.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13632.t1, Cre12.g546150.t1.1 JGI147968 30793143 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0053
motif_0053_1

motif_0053_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.9
Motif Bicluster: 
bicluster_0053
Width: 
24
Number of Sites: 
1
Consensus: 
GcAgCGGcaGtaGCggCgGCngcg
motif_0053_2

motif_0053_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1100
Motif Bicluster: 
bicluster_0053
Width: 
15
Number of Sites: 
1
Consensus: 
TttGTaTtgTTgagT
 0.13
bicluster_0054
motif_0054_1

motif_0054_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.032
Motif Bicluster: 
bicluster_0054
Width: 
24
Number of Sites: 
1
Consensus: 
CTGCnGcTGcaGCgGcTGCtGCgG
motif_0054_2

motif_0054_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
170
Motif Bicluster: 
bicluster_0054
Width: 
24
Number of Sites: 
1
Consensus: 
cCGgggCCACCAgcgCCACCTgCa
 0.10

GO Terms

GO:0009512 -

cytochrome b6f complex

GO Category: 
cellular_component
Details: 
Complex that transfers electrons from reduced plastoquinone to oxidized plastocyanin and translocates protons from the stroma to the lumen. The complex contains a core structure of three catalytic subunits: cytochrome b, the Rieske iron sulfur protein (ISP), and cytochrome f, which are arranged in an integral membrane-bound dimeric complex; additional subunits are present, and vary among different species.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI147968

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