Cre12.g554800.t1.2 phosphoribulokinase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g554800.t1.2 chromosome_12 phosphoribulokinase CDS 7636065 7639700 - 3 635

Phytozome

Locus Genomic View Functional Annotation
Cre12.g554800.t1.2 Cre12.g554800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PRK1 g13438.t1, Cre12.g554800.t1.1 JGI195910 30793573 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0146
motif_0146_1

motif_0146_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000081
Motif Bicluster: 
bicluster_0146
Width: 
15
Number of Sites: 
1
Consensus: 
CAgCAGCAcCaGCAg
motif_0146_2

motif_0146_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7400
Motif Bicluster: 
bicluster_0146
Width: 
15
Number of Sites: 
1
Consensus: 
CAGCAAgcTGCAAGC
 0.22
bicluster_0193
motif_0193_1

motif_0193_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000063
Motif Bicluster: 
bicluster_0193
Width: 
23
Number of Sites: 
1
Consensus: 
CACaCacacatACACaCAtgCAa
motif_0193_2

motif_0193_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0193
Width: 
24
Number of Sites: 
1
Consensus: 
gaGGtaGCAGtgGCgGgGGcaGCG
 0.15

GO Terms

GO:0005524 GO:0008152 GO:0016301 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

kinase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195910

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