Cre13.g576650.t1.2 histidine biosynthesis bifunctional protein (HISIE)

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g576650.t1.2 chromosome_13 histidine biosynthesis bifunctional protein (HISIE) CDS 1984674 1987559 + 2 885

Phytozome

Locus Genomic View Functional Annotation
Cre13.g576650.t1.2 Cre13.g576650.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HIS4 g14170.t1, Cre13.g576650.t1.1 JGI187988 30784578 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0044
motif_0044_1

motif_0044_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.5e-16
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
TgctcCtGCTgcTGCTgCTGC
motif_0044_2

motif_0044_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.76
Motif Bicluster: 
bicluster_0044
Width: 
21
Number of Sites: 
1
Consensus: 
cGTtAnttGtacaattatAaA
 0.14
bicluster_0111
motif_0111_1

motif_0111_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.005
Motif Bicluster: 
bicluster_0111
Width: 
21
Number of Sites: 
1
Consensus: 
TAanTgactAatAaTAAtGtT
motif_0111_2

motif_0111_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000062
Motif Bicluster: 
bicluster_0111
Width: 
15
Number of Sites: 
1
Consensus: 
GCTcctGCTgCtGCT
 0.18

GO Terms

GO:0004635 GO:0000105 -

phosphoribosyl-AMP cyclohydrolase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 1-(5-phosphonatoribosyl)-5'-AMP + H(2)O = 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide.

histidine biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of histidine, 2-amino-3-(1H-imidazol-4-yl)propanoic acid.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI187988

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