Cre16.g649600.t1.2 pumilio 23

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g649600.t1.2 chromosome_16 pumilio 23 CDS 1081990 1088125 - 6 135

Phytozome

Locus Genomic View Functional Annotation
Cre16.g649600.t1.2 Cre16.g649600.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PUF4 g15718.t1, Cre16.g649600.t1.1 Not available 30776977 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0061
motif_0061_1

motif_0061_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
13
Motif Bicluster: 
bicluster_0061
Width: 
21
Number of Sites: 
1
Consensus: 
AnnCATTTTcTtAaAagacaa
motif_0061_2

motif_0061_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
550
Motif Bicluster: 
bicluster_0061
Width: 
23
Number of Sites: 
1
Consensus: 
AaTAtnaTAatgTntgTGtatTt
 0.13
bicluster_0108
motif_0108_1

motif_0108_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000068
Motif Bicluster: 
bicluster_0108
Width: 
23
Number of Sites: 
1
Consensus: 
CTGCtGCcgcTGCTgCTGCtgCa
motif_0108_2

motif_0108_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.02
Motif Bicluster: 
bicluster_0108
Width: 
15
Number of Sites: 
1
Consensus: 
GCCAgCacCAGCAGC
 0.12

GO Terms

GO:0003723 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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