Cre16.g672385.t1.1 histidinol phosphate aminotransferase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g672385.t1.1 chromosome_16 histidinol phosphate aminotransferase 1 CDS 6716808 6721288 + 4 480

Phytozome

Locus Genomic View Functional Annotation
Cre16.g672385.t1.1 Cre16.g672385.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
HIS5 g16702.t1, Cre01.g065150.t1.1, Cre01.g065150.t1.2 Not available 30778051 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0121
motif_0121_1

motif_0121_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000032
Motif Bicluster: 
bicluster_0121
Width: 
21
Number of Sites: 
1
Consensus: 
cAgnTatGTAtgTGTgggTat
motif_0121_2

motif_0121_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000035
Motif Bicluster: 
bicluster_0121
Width: 
24
Number of Sites: 
1
Consensus: 
TgCngCcgcTGctgCcGctGCTGC
 0.29
bicluster_0139
motif_0139_1

motif_0139_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
9.2e-24
Motif Bicluster: 
bicluster_0139
Width: 
24
Number of Sites: 
1
Consensus: 
ACACAcaCaCACaCACacACACAC
motif_0139_2

motif_0139_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000038
Motif Bicluster: 
bicluster_0139
Width: 
21
Number of Sites: 
1
Consensus: 
ACaCaCACACAcAtACACACA
 0.18

GO Terms

GO:0030170 GO:0009058 -

pyridoxal phosphate binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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